Tissue expression of FAM117A - Summary - The Human Protein Atlas

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FAM117A

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	FAM117A
Gene description	Family with sequence similarity 117, member A
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	4
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression in all tissues.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Approved based on 1 antibody. HPA022531
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	FAM117A
Synonyms
Description	Family with sequence similarity 117, member A (HGNC Symbol)
Entrez gene summary
Chromosome	17
Cytoband	q21.33
Chromosome location (bp)	49710332 - 49789180
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000121104 (version 83.38)
Entrez gene	81558
UniProt	Q9C073 (UniProt - Evidence at protein level)
neXtProt	NX_Q9C073
Antibodypedia	FAM117A antibodies

PROTEIN BROWSER

FAM117A-001	FAM117A-002	FAM117A-009	FAM117A-012

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
FAM117A-001 ENSP00000240364 ENST00000240364	Q9C073 [Direct mapping] Protein FAM117A Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all		453 aa 48.3 kDa	No	0
FAM117A-002 ENSP00000465808 ENST00000513602	Q9C073 [Direct mapping] Protein FAM117A Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		181 aa 19.4 kDa	No	0
FAM117A-009 ENSP00000421412 ENST00000506156	D6RFX7 [Direct mapping] Protein FAM117A Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		223 aa 23.5 kDa	No	0
FAM117A-012 ENSP00000427326 ENST00000511743	D6RJ87 [Direct mapping] Protein FAM117A Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		230 aa 25.1 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.