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CEP89

COLON - Expression summary

RNA expression
HPA:4.7TPM
GTEx:3.2RPKM
FANTOM5:13.3Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA039382

  

Antibody HPA040056

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Low   Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

4.7
overview Male, age 54 Sample 1
TPM: 4.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 6.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 5.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.7
Samples: 149

Max RPKM: 5.2
Min RPKM: 2.2
Std RPKM: 0.6
Median RPKM: 3.7
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 5.2
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 5.0
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 4.8
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 4.8
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 4.8
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 4.7
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 4.7
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 4.7
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 4.6
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 4.6
Show all
Colon - Transverse
RPKM: 2.8
Samples: 196

Max RPKM: 4.7
Min RPKM: 0.6
Std RPKM: 0.7
Median RPKM: 2.8
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 4.7
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 4.5
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 4.3
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 4.3
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 4.2
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 4.1
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 4.1
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 4.1
GTEX-P78B-1726-SM-3P5ZV 40-49 years, female 4.1
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 4.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

13.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 13.3
FF:10014-101C5 62,83,84 years, mixed 13.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.