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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:9.6TPM
GTEx:2.4RPKM
FANTOM5:10.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:High
Peripheral nerve:Not available
 
 
 

Antibody staining

Antibody HPA038319

  

Antibody HPA038320

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Not detected   High  

Peripheral nerve

 Not detected  
      
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Medium
Chondrocytes:Low
 

Antibody staining

Antibody HPA038319

  

Antibody HPA038320

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Not detected   Medium  

Chondrocytes

 Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

9.6
N/A Female, age 80 Sample 1
TPM: 9.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 8.8
N/A Female, age 57 Sample 3
TPM: 8.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 11.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 9.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

2.4

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 2.7
Samples: 350

Max RPKM: 4.9
Min RPKM: 1.2
Std RPKM: 0.6
Median RPKM: 2.6
GTEX-13X6K-0226-SM-5QGPB 60-69 years, female 4.9
GTEX-P44H-0326-SM-2XCES 40-49 years, male 4.7
GTEX-S7SE-0226-SM-2XCD4 50-59 years, male 4.7
GTEX-OXRL-0226-SM-3NB18 50-59 years, male 4.4
GTEX-PWCY-1926-SM-3NB25 20-29 years, female 4.3
GTEX-TSE9-0226-SM-3DB84 60-69 years, female 4.2
GTEX-Y114-2326-SM-4TT7X 50-59 years, female 4.2
GTEX-PLZ6-1326-SM-3NB24 30-39 years, male 4.1
GTEX-S32W-2226-SM-2XCAY 50-59 years, female 4.1
GTEX-WEY5-1926-SM-3GIL8 40-49 years, female 4.1
Show all
Adipose - Visceral (Omentum)
RPKM: 2.0
Samples: 227

Max RPKM: 3.8
Min RPKM: 0.9
Std RPKM: 0.5
Median RPKM: 2.0
GTEX-ZF29-0826-SM-5S2NP 60-69 years, female 3.8
GTEX-13OVJ-0926-SM-5K7U1 50-59 years, female 3.5
GTEX-XBED-1326-SM-4AT4F 60-69 years, male 3.5
GTEX-13FH7-1926-SM-5J2OL 50-59 years, female 3.4
GTEX-WFJO-1026-SM-3GIKL 30-39 years, male 3.4
GTEX-13X6K-0726-SM-5LU2Z 60-69 years, female 3.3
GTEX-13CF3-1126-SM-5LZXB 60-69 years, female 3.2
GTEX-13OVL-0826-SM-5L3GV 50-59 years, male 3.2
GTEX-13PL7-1226-SM-5SIAR 60-69 years, female 3.0
GTEX-ZDYS-2226-SM-5S2MI 50-59 years, male 3.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

10.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 10.5
FF:10010-101C1 65,65,76 years, mixed 10.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.