Tissue expression of CAT - Staining in adipose tissue - The Human Protein Atlas

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CAT

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TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	297.6	TPM
GTEx:	81.2	RPKM
FANTOM5:	378.8	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Chondrocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA051282		Antibody HPA055838		Antibody CAB001515
Adipocytes	Not detected		Not detected		Not detected
Chondrocytes	Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected
Peripheral nerve	Not detected		Not detected		Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA051282		Antibody HPA055838		Antibody CAB001515
Adipocytes	Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected
Peripheral nerve	Not detected		Not detected		Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	297.6

N/A

Female, age 80

Sample 1
TPM: 275.6

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 429.2

N/A

Female, age 57

Sample 3
TPM: 386.6

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 115.8

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 281

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	81.2

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 85.8

Samples: 350

Max RPKM: 196.3
Min RPKM: 15.5
Std RPKM: 33.7
Median RPKM: 80.7

GTEX-ZDTT-2626-SM-5S2OP

60-69 years, male

196.3

GTEX-ZXES-2026-SM-5NQ6R

30-39 years, female

193.6

GTEX-XMK1-2226-SM-4B673

40-49 years, male

186.3

GTEX-XUYS-0226-SM-47JX1

50-59 years, male

180.6

GTEX-145ME-1926-SM-5SI9S

40-49 years, female

179.5

GTEX-ZVTK-0526-SM-5GZWT

20-29 years, male

170.6

GTEX-Z93T-0226-SM-5HL5Z

50-59 years, male

168.6

GTEX-YB5E-2126-SM-5IFI7

40-49 years, male

167.2

GTEX-ZQG8-1526-SM-5HL65

60-69 years, female

166.1

GTEX-T2IS-0226-SM-32QPH

20-29 years, female

165.8

Show all

Adipose - Visceral (Omentum)
RPKM: 74.0

Samples: 227

Max RPKM: 187.9
Min RPKM: 9.0
Std RPKM: 31.0
Median RPKM: 68.0

GTEX-ZF2S-1526-SM-5S2OO

50-59 years, female

187.9

GTEX-VUSG-1426-SM-3GIJN

50-59 years, male

180.8

GTEX-ZPU1-1226-SM-5HL71

40-49 years, male

161.0

GTEX-Y5V5-0226-SM-5S2N8

60-69 years, female

157.6

GTEX-ZYFC-1826-SM-5GZZA

50-59 years, male

155.2

GTEX-131XF-0726-SM-5GIE5

60-69 years, male

149.7

GTEX-WYJK-1426-SM-3NM8V

50-59 years, male

148.3

GTEX-XMK1-0926-SM-4B66X

40-49 years, male

146.0

GTEX-ZF29-0826-SM-5S2NP

60-69 years, female

145.1

GTEX-ZPCL-1026-SM-5GCOX

60-69 years, female

142.3

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	378.8

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 378.8

65,65,76 years, mixed

378.8

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.