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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

LIAS

Gene description

Lipoic acid synthetase

Protein class

Disease related genes
Enzymes
Potential drug targets
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in several tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly not consistent with RNA expression data. Pending external verification.

Reliability score

Approved based on 2 antibodies.
HPA018842 , HPA019076
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (favourable).
Renal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA018842
HPA019076

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer cells were negative. Colorectal and breast cancers displayed weak to moderate staining in most cases.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

A few cases of melanomas displayed strong cytoplasmic positivity while most basal cell carcinomas in skin displayed moderate cytoplasmic positivity. Remaining cancers were negative or weakly stained.

GENE INFORMATION

Gene name

LIAS (HGNC Symbol)

Synonyms

LAS

Description

Lipoic acid synthetase (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene belongs to the biotin and lipoic acid synthetases family. It localizes in mitochondrion and plays an important role in alpha-(+)-lipoic acid synthesis. It may also function in the sulfur insertion chemistry in lipoate biosynthesis. Alternative splicing occurs at this locus and two transcript variants encoding distinct isoforms have been identified. [provided by RefSeq, Jul 2008]

Chromosome

4

Cytoband

p14

Chromosome location (bp)

39459000 - 39477653

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000121897 (version 83.38)

Entrez gene

11019

UniProt

O43766 (UniProt - Evidence at protein level)

neXtProt

NX_O43766

Antibodypedia

LIAS antibodies

PROTEIN BROWSER

LIAS-001
LIAS-002
LIAS-006
LIAS-008

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

LIAS-001
ENSP00000261434
ENST00000261434
O43766 [Direct mapping]
Lipoyl synthase, mitochondrial
A0A024R9W0 [Target identity:100%; Query identity:100%]
Lipoyl synthase, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted intracellular proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001843 [neural tube closure]
GO:0003824 [catalytic activity]
GO:0005739 [mitochondrion]
GO:0006954 [inflammatory response]
GO:0006979 [response to oxidative stress]
GO:0009107 [lipoate biosynthetic process]
GO:0009249 [protein lipoylation]
GO:0016992 [lipoate synthase activity]
GO:0032496 [response to lipopolysaccharide]
GO:0046872 [metal ion binding]
GO:0051536 [iron-sulfur cluster binding]
GO:0051539 [4 iron, 4 sulfur cluster binding]
Show all
372 aa
41.9 kDa
No 0
LIAS-002
ENSP00000371270
ENST00000381846
O43766 [Direct mapping]
Lipoyl synthase, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted intracellular proteins
Disease related genes
Potential drug targets
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0005739 [mitochondrion]
GO:0006954 [inflammatory response]
GO:0006979 [response to oxidative stress]
GO:0009107 [lipoate biosynthetic process]
GO:0009249 [protein lipoylation]
GO:0016992 [lipoate synthase activity]
GO:0032496 [response to lipopolysaccharide]
GO:0046872 [metal ion binding]
GO:0051536 [iron-sulfur cluster binding]
GO:0051539 [4 iron, 4 sulfur cluster binding]
Show all
329 aa
37.1 kDa
No 0
LIAS-006
ENSP00000425580
ENST00000513731
D6RCP8 [Direct mapping]
Lipoyl synthase, mitochondrial
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0009107 [lipoate biosynthetic process]
GO:0016992 [lipoate synthase activity]
GO:0051536 [iron-sulfur cluster binding]
GO:0051539 [4 iron, 4 sulfur cluster binding]
Show all
242 aa
27.5 kDa
No 0
LIAS-008
ENSP00000340676
ENST00000340169
O43766 [Direct mapping]
Lipoyl synthase, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted intracellular proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0005739 [mitochondrion]
GO:0006954 [inflammatory response]
GO:0006979 [response to oxidative stress]
GO:0009107 [lipoate biosynthetic process]
GO:0009249 [protein lipoylation]
GO:0016992 [lipoate synthase activity]
GO:0032496 [response to lipopolysaccharide]
GO:0046872 [metal ion binding]
GO:0051536 [iron-sulfur cluster binding]
GO:0051539 [4 iron, 4 sulfur cluster binding]
Show all
322 aa
36.1 kDa
No 0

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