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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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NPY
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  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

NPY

Gene description

Neuropeptide Y

Protein class

Plasma proteins
Predicted secreted proteins

Predicted localization

Secreted

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Tissue enriched (prostate cancer)
HPA (cell line):Cell line enriched (SH-SY5Y)
HPA (normal tissue):Group enriched (adrenal gland, cerebral cortex, prostate)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression mainly in peripheral nerves, prostate, a subset of cells in adrenal gland and a subset of neuronal cells.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Supported based on 4 antibodies.
HPA044572 , HPA056798 , CAB016733 , CAB034368
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in endometrial cancer (unfavourable).
Endometrial cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Tissue enriched (prostate cancer)

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY

HPA044572
HPA056798
CAB016733
CAB034368

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

A few prostate cancers were strongly stained. Moderate cytoplasmic staining was observed in several cases of melanomas, ovarian, endometrial, testicular and renal cancers. Remaining cancers were weakly stained or were negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Several cases of prostate cancers showed moderate to strong cytoplasmic staining. Few cases of melanomas displayed weak nuclear positivity. Remaining cancer tissues were negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Cases of prostate cancer were strongly stained. Fractions of cases in most cancers displayed moderate positivity. Cancers cells in general were weakly stained or negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Several prostate cancers showed moderate to strong cytoplasmic positivity. Remaining tumour cells were in general negative.

GENE INFORMATION

Gene name

NPY (HGNC Symbol)

Synonyms

PYY4

Description

Neuropeptide Y (HGNC Symbol)

Entrez gene summary

This gene encodes a neuropeptide that is widely expressed in the central nervous system and influences many physiological processes, including cortical excitability, stress response, food intake, circadian rhythms, and cardiovascular function. The neuropeptide functions through G protein-coupled receptors to inhibit adenylyl cyclase, activate mitogen-activated protein kinase (MAPK), regulate intracellular calcium levels, and activate potassium channels. A polymorphism in this gene resulting in a change of leucine 7 to proline in the signal peptide is associated with elevated cholesterol levels, higher alcohol consumption, and may be a risk factor for various metabolic and cardiovascular diseases. The protein also exhibits antimicrobial activity against bacteria and fungi. [provided by RefSeq, Oct 2014]

Chromosome

7

Cytoband

p15.3

Chromosome location (bp)

24284163 - 24291865

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000122585 (version 83.38)

Entrez gene

4852

UniProt

P01303 (UniProt - Evidence at protein level)

neXtProt

NX_P01303

Antibodypedia

NPY antibodies

PROTEIN BROWSER

NPY-001
NPY-002
NPY-003

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

NPY-001
ENSP00000242152
ENST00000242152
P01303 [Direct mapping]
Pro-neuropeptide Y Neuropeptide Y C-flanking peptide of NPY
A4D158 [Target identity:100%; Query identity:100%]
Neuropeptide Y; cDNA, FLJ92442, Homo sapiens neuropeptide Y (NPY), mRNA
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001878 [response to yeast]
GO:0004930 [G-protein coupled receptor activity]
GO:0005102 [receptor binding]
GO:0005179 [hormone activity]
GO:0005184 [neuropeptide hormone activity]
GO:0005246 [calcium channel regulator activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005623 [cell]
GO:0005794 [Golgi apparatus]
GO:0006816 [calcium ion transport]
GO:0006928 [movement of cell or subcellular component]
GO:0007187 [G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger]
GO:0007218 [neuropeptide signaling pathway]
GO:0007268 [synaptic transmission]
GO:0007586 [digestion]
GO:0007610 [behavior]
GO:0007631 [feeding behavior]
GO:0008015 [blood circulation]
GO:0008283 [cell proliferation]
GO:0008343 [adult feeding behavior]
GO:0019731 [antibacterial humoral response]
GO:0019732 [antifungal humoral response]
GO:0021954 [central nervous system neuron development]
GO:0021987 [cerebral cortex development]
GO:0031175 [neuron projection development]
GO:0031841 [neuropeptide Y receptor binding]
GO:0032098 [regulation of appetite]
GO:0032100 [positive regulation of appetite]
GO:0045087 [innate immune response]
GO:0050829 [defense response to Gram-negative bacterium]
GO:0050830 [defense response to Gram-positive bacterium]
Show all
97 aa
10.9 kDa
Yes 0
NPY-002
ENSP00000385282
ENST00000405982
P01303 [Direct mapping]
Pro-neuropeptide Y Neuropeptide Y C-flanking peptide of NPY
A4D158 [Target identity:100%; Query identity:100%]
Neuropeptide Y; cDNA, FLJ92442, Homo sapiens neuropeptide Y (NPY), mRNA
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001878 [response to yeast]
GO:0004930 [G-protein coupled receptor activity]
GO:0005102 [receptor binding]
GO:0005179 [hormone activity]
GO:0005184 [neuropeptide hormone activity]
GO:0005246 [calcium channel regulator activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005623 [cell]
GO:0005794 [Golgi apparatus]
GO:0006816 [calcium ion transport]
GO:0006928 [movement of cell or subcellular component]
GO:0007187 [G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger]
GO:0007218 [neuropeptide signaling pathway]
GO:0007268 [synaptic transmission]
GO:0007586 [digestion]
GO:0007610 [behavior]
GO:0007631 [feeding behavior]
GO:0008015 [blood circulation]
GO:0008283 [cell proliferation]
GO:0008343 [adult feeding behavior]
GO:0019731 [antibacterial humoral response]
GO:0019732 [antifungal humoral response]
GO:0021954 [central nervous system neuron development]
GO:0021987 [cerebral cortex development]
GO:0031175 [neuron projection development]
GO:0031841 [neuropeptide Y receptor binding]
GO:0032098 [regulation of appetite]
GO:0032100 [positive regulation of appetite]
GO:0045087 [innate immune response]
GO:0050829 [defense response to Gram-negative bacterium]
GO:0050830 [defense response to Gram-positive bacterium]
Show all
97 aa
10.9 kDa
Yes 0
NPY-003
ENSP00000384364
ENST00000407573
P01303 [Direct mapping]
Pro-neuropeptide Y Neuropeptide Y C-flanking peptide of NPY
A4D158 [Target identity:100%; Query identity:100%]
Neuropeptide Y; cDNA, FLJ92442, Homo sapiens neuropeptide Y (NPY), mRNA
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001664 [G-protein coupled receptor binding]
GO:0001878 [response to yeast]
GO:0004930 [G-protein coupled receptor activity]
GO:0005102 [receptor binding]
GO:0005179 [hormone activity]
GO:0005184 [neuropeptide hormone activity]
GO:0005246 [calcium channel regulator activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005623 [cell]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0006816 [calcium ion transport]
GO:0006928 [movement of cell or subcellular component]
GO:0007187 [G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger]
GO:0007218 [neuropeptide signaling pathway]
GO:0007268 [synaptic transmission]
GO:0007586 [digestion]
GO:0007610 [behavior]
GO:0007631 [feeding behavior]
GO:0008015 [blood circulation]
GO:0008217 [regulation of blood pressure]
GO:0008283 [cell proliferation]
GO:0008343 [adult feeding behavior]
GO:0019731 [antibacterial humoral response]
GO:0019732 [antifungal humoral response]
GO:0021954 [central nervous system neuron development]
GO:0021987 [cerebral cortex development]
GO:0031175 [neuron projection development]
GO:0031841 [neuropeptide Y receptor binding]
GO:0032098 [regulation of appetite]
GO:0032100 [positive regulation of appetite]
GO:0045087 [innate immune response]
GO:0050829 [defense response to Gram-negative bacterium]
GO:0050830 [defense response to Gram-positive bacterium]
Show all
97 aa
10.9 kDa
Yes 0

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The Human Protein Atlas project is funded
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