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PKN1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:16.7TPM
GTEx:35.1RPKM
FANTOM5:26.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA003982

  

Antibody CAB010278

  

Endothelial cells

 Medium   Medium  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

16.7
overview Male, age 54 Sample 1
TPM: 23
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 17.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 8.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 17.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 19.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 23.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 8.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 10.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 22.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 22
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 17.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

35.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 47.9
Samples: 149

Max RPKM: 87.1
Min RPKM: 25.2
Std RPKM: 11.4
Median RPKM: 46.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 87.1
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 86.4
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 74.3
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 72.0
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 71.7
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 71.3
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 70.6
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 68.5
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 67.6
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 66.9
Show all
Colon - Transverse
RPKM: 25.5
Samples: 196

Max RPKM: 66.5
Min RPKM: 5.7
Std RPKM: 13.7
Median RPKM: 22.8
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 66.5
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 59.3
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 55.2
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 54.5
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 53.1
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 52.1
GTEX-S341-1426-SM-4AD6U 40-49 years, female 51.2
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 50.2
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 49.6
GTEX-11GSP-1626-SM-5986N 60-69 years, female 49.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

26.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 26.0
FF:10014-101C5 62,83,84 years, mixed 26.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.