We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ATF1
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA055069

 

Antibody HPA055406

 

Antibody CAB016222

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Santa Cruz Biotechnology
 

Product name

HPA055069   HPA055406   sc-270  

Host species

Rabbit   Rabbit   Mouse  

Clonality

pAb   pAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Protein A/G  

Other gene match

     

Released in version

12   12   4  

References

     

Proper citation

Atlas Antibodies Cat#HPA055069, RRID:AB_2682688   Atlas Antibodies Cat#HPA055406, RRID:AB_2682807   Santa Cruz Biotechnology Cat#sc-270, RRID:AB_2290030  

VALIDATION SUMMARY

 
 

Antibody HPA055069

 

Antibody HPA055406

 

Antibody CAB016222

 
Immunocytochemistry


Validated

Validated
 

Validated
  Supported  
Immunohistochemistry

Supported     Supported  
Western blot


Validated
  Uncertain   Uncertain  
Protein array

Supported   Supported    

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA055069

 

Antibody HPA055406

 

Antibody CAB016222

 

Formal validation: Genetic

Validated

Significant downregulation > 25% by both siRNA:s.
     

     

Figure description

Nuclear region of segmented cells in 10x-images      

Antibody dilution

1:36      
 

Formal validation: Independent

Validated

Antibody staining overlaps with antibody HPA055406.
 
Validated

Antibody staining overlaps with antibody HPA055069.
   
 

Standard validation

Supported   Supported   Supported  

     

Figure description

Immunofluorescent staining of human cell line HeLa shows localization to nucleoplasm.   Immunofluorescent staining of human cell line U-2 OS shows localization to nucleoplasm.   Immunofluorescent staining of human cell line A-431 shows localization to nucleoplasm.  

Antibody dilution

1:36   1:93   1:25  

Literature conformity

The subcellular location is supported by literature.   The subcellular location is supported by literature.   The subcellular location is supported by literature.  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA055069

 

Antibody HPA055406

 

Antibody CAB016222

 

Standard validation

Supported     Supported  

     

Figure description

Immunohistochemical staining of human kidney shows moderate nuclear positivity in renal tubules and cells in glomeruli.     Immunohistochemical staining of human kidney shows strong nuclear positivity.  

Expression

RNA: detected in 37 tissues
Protein: detected in 49 cell types
    RNA: detected in 37 tissues
Protein: detected in 73 cell types
 

Retrieval

HIER pH6     HIER pH6  

Antibody dilution

1:350     1:100  

Literature conformity

Consistent with extensive gene/protein characterization data.     Consistent with extensive gene/protein characterization data.  

RNA consistency

Mainly consistent with RNA expression data.     Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA055069

 

Antibody HPA055406

 

Antibody CAB016222

 

Formal validation: Genetic

Validated

Downregulation visible in both siRNA lanes
     

     

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: siRNA 1
Lane 3: siRNA 2
Lane 4: Scrambled
     

Target mass (kDa)

29.2, 20.8, 17.7      

Loading control

Total protein image      

Antibody dilution

1:80      
 

Standard validation

Uncertain

Analysis performed using a standard panel of samples.
No bands detected.
  Uncertain

Analysis performed using a standard panel of samples.
No bands detected.
  Uncertain

Analysis performed using a standard panel of samples.
Only bands not corresponding to the predicted size.
 

     

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
   

Target mass (kDa)

29.2, 20.8, 17.7   29.2   29.2, 20.8, 17.7  

Antibody dilution

1:180   1:460   1:500  

PROTEIN ARRAY

 
 

Antibody HPA055069

 

Antibody HPA055406

 

Antibody CAB016222

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

     

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:1450   1:3700    

ANTIGEN INFORMATION

 
 

Antibody HPA055069

 

Antibody HPA055406

 

Antibody CAB016222

 

Antigen

Recombinant protein fragment   Recombinant protein fragment   Not known  

Length (aa)

64   34    

Antigen sequence

MEDSHKSTTSETAPQPGSAVQGAHISHIAQQVSSLSESEESQDSSDSIGS
SQKAHGILARRPSY
 
TYQIRTTPSATSLPQTVVMTSPVTLTSQTTKTDD
 
 

Matching transcripts

ATF1-001 - ENSP00000262053 [100%]
ATF1-003 - ENSP00000448592 [100%]
ATF1-004 - ENSP00000448921 [100%]
  ATF1-001 - ENSP00000262053 [100%]
   

Other gene match

     
ANTIGEN VIEW
ATF1-001
ATF1-003
ATF1-004
 

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.