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AMD1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:37.7TPM
GTEx:19.0RPKM
FANTOM5:91.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA029281

  

Antibody HPA029282

  

Adipocytes

 Not detected   Low  

Chondrocytes

 Medium   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Not detected   Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not detected
 

Antibody staining

Antibody HPA029281

  

Antibody HPA029282

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Low   Not detected  

Chondrocytes

 Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

37.7
N/A Female, age 80 Sample 1
TPM: 15.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 17.3
N/A Female, age 57 Sample 3
TPM: 12.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 62.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 80.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

19.0

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 15.3
Samples: 350

Max RPKM: 47.3
Min RPKM: 8.3
Std RPKM: 4.4
Median RPKM: 14.5
GTEX-T5JW-1726-SM-3GADN 20-29 years, female 47.3
GTEX-WEY5-1926-SM-3GIL8 40-49 years, female 33.9
GTEX-REY6-0326-SM-2TF5A 60-69 years, male 28.1
GTEX-QESD-1526-SM-2S1QT 20-29 years, male 27.7
GTEX-TSE9-0226-SM-3DB84 60-69 years, female 27.5
GTEX-S4Q7-1626-SM-3K2AE 20-29 years, male 26.9
GTEX-QEG5-0326-SM-2S1PB 20-29 years, male 26.8
GTEX-11DXX-2326-SM-5Q5A2 60-69 years, female 25.6
GTEX-QDT8-0226-SM-32PL4 30-39 years, female 25.5
GTEX-13NZ9-0526-SM-5J1OX 50-59 years, male 25.1
Show all
Adipose - Visceral (Omentum)
RPKM: 24.7
Samples: 227

Max RPKM: 66.4
Min RPKM: 8.9
Std RPKM: 10.2
Median RPKM: 22.1
GTEX-13QBU-1326-SM-5LU4K 40-49 years, female 66.4
GTEX-Y114-1326-SM-4TT9A 50-59 years, female 64.3
GTEX-WFJO-1026-SM-3GIKL 30-39 years, male 55.1
GTEX-133LE-0926-SM-5P9J1 20-29 years, female 52.7
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 52.1
GTEX-ZTSS-1026-SM-5985N 40-49 years, male 51.3
GTEX-ZA64-0926-SM-5HL7H 20-29 years, male 50.2
GTEX-ZTX8-0726-SM-59HL9 20-29 years, male 47.9
GTEX-ZV7C-0826-SM-59HK8 50-59 years, male 47.9
GTEX-XBEW-1726-SM-4RGMA 40-49 years, male 47.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

91.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 91.6
FF:10010-101C1 65,65,76 years, mixed 91.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.