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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:3.4TPM
GTEx:2.3RPKM
FANTOM5:2.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Not detected
Fibroblasts:Low
 
 

Antibody staining

Antibody HPA059943

  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA059943

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

3.4
N/A Female, age 80 Sample 1
TPM: 4.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 2.9
N/A Female, age 57 Sample 3
TPM: 2.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 3.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 3.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

2.3

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 2.5
Samples: 350

Max RPKM: 6.4
Min RPKM: 0.3
Std RPKM: 1.1
Median RPKM: 2.3
GTEX-XBEC-0326-SM-4AT4M 50-59 years, male 6.4
GTEX-ZEX8-2326-SM-5S2MN 50-59 years, male 6.0
GTEX-R55F-1426-SM-2TF53 50-59 years, male 5.7
GTEX-139TU-0226-SM-5J1NM 60-69 years, male 5.5
GTEX-144GL-0226-SM-5QGOX 50-59 years, male 5.5
GTEX-13FTY-0626-SM-5L3F8 40-49 years, female 5.4
GTEX-13O3Q-2326-SM-5KM3G 50-59 years, male 5.4
GTEX-111FC-0226-SM-5N9B8 60-69 years, male 5.1
GTEX-113IC-0226-SM-5HL5C 60-69 years, male 5.1
GTEX-WVLH-0226-SM-3MJG6 50-59 years, male 5.0
Show all
Adipose - Visceral (Omentum)
RPKM: 1.9
Samples: 227

Max RPKM: 5.3
Min RPKM: 0.4
Std RPKM: 0.9
Median RPKM: 1.7
GTEX-ZDXO-2326-SM-5LU9W 60-69 years, male 5.3
GTEX-XUZC-1126-SM-4BOPZ 30-39 years, female 4.7
GTEX-YECK-1426-SM-5IFHE 60-69 years, male 4.6
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 4.5
GTEX-11ZTS-1326-SM-5EQMA 60-69 years, female 4.5
GTEX-1399T-1326-SM-5PNVH 60-69 years, male 4.4
GTEX-13G51-0526-SM-5IJCQ 60-69 years, male 4.3
GTEX-11DXY-0326-SM-5H12F 60-69 years, male 4.2
GTEX-13VXT-0926-SM-5LU5K 20-29 years, female 4.2
GTEX-13NZ9-2026-SM-5KM1U 50-59 years, male 4.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

2.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 2.0
FF:10010-101C1 65,65,76 years, mixed 2.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.