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EEF1E1
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

EEF1E1

Gene description

Eukaryotic translation elongation factor 1 epsilon 1

Protein class

Predicted intracellular proteins
Predicted membrane proteins

Predicted localization

Intracellular,Membrane

Number of transcripts

6
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Ubiquitous cytoplasmic expression.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

Approved based on 1 antibody.
HPA027901
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical
Cerebral cortexHippocampusCaudateCerebellumThyroid glandParathyroid glandAdrenal glandAppendixBone marrowLymph nodeTonsilSpleenHeart muscleSkeletal muscleSmooth muscleNasopharynxBronchusLungLiverGallbladderPancreasOral mucosaSalivary glandEsophagusStomachDuodenumSmall intestineColonRectumKidneyUrinary bladderTestisEpididymisProstateSeminal vesicleBreastVaginaCervix, uterineEndometriumFallopian tubeOvaryPlacentaAdipose tissueSoft tissueSkinNotdetectedLowMediumHighSCORE

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
Cerebral cortexThyroid glandParathyroid glandAdrenal glandAppendixBone marrowLymph nodeTonsilSpleenHeart muscleSkeletal muscleSmooth muscleLungLiverGallbladderPancreasSalivary glandEsophagusStomachDuodenumSmall intestineColonRectumKidneyUrinary bladderTestisEpididymisProstateSeminal vesicleBreastCervix, uterineEndometriumFallopian tubeOvaryPlacentaAdipose tissueSkin020406080100120TPM
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
HypothalamusPituitary glandCerebral cortexHippocampusCaudateCerebellumThyroid glandAdrenal glandSpleenHeart muscleSkeletal muscleLungLiverPancreasSalivary glandEsophagusStomachSmall intestineColonKidneyUrinary bladderTestisProstateBreastVaginaCervix, uterineEndometriumFallopian tubeOvaryAdipose tissueSkin024681012RPKM
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
Pituitary glandBrainHippocampusCaudateCerebellumThyroid glandAppendixLymph nodeTonsilSpleenHeart muscleSkeletal muscleSmooth muscleLungLiverGallbladderPancreasSalivary glandEsophagusSmall intestineColonKidneyUrinary bladderTestisEpididymisProstateSeminal vesicleBreastVaginaCervix, uterineEndometriumOvaryPlacentaAdipose tissueRetina020406080100Tags Per Million

GENE INFORMATION

Gene name

EEF1E1 (HGNC Symbol)

Synonyms

AIMP3, P18

Description

Eukaryotic translation elongation factor 1 epsilon 1 (HGNC Symbol)

Entrez gene summary

This gene encodes a multifunctional protein that localizes to both the cytoplasm and nucleus. In the cytoplasm, the encoded protein is an auxiliary component of the macromolecular aminoacyl-tRNA synthase complex. However, its mouse homolog has been shown to translocate to the nucleus in response to DNA damage, and it plays a positive role in ATM/ATR-mediated p53 activation. Alternative splicing results in multiple transcript variants. Read-through transcription also exists between this gene and the neighboring downstream MUTED (muted homolog) gene. An EEF1E1-related pseudogene has been identified on chromosome 2. [provided by RefSeq, Dec 2010]

Chromosome

6

Cytoband

p24.3

Chromosome location (bp)

8073360 - 8102578

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000124802 (version 83.38)

Entrez gene

9521

UniProt

O43324 (UniProt - Evidence at protein level)

neXtProt

NX_O43324

Antibodypedia

EEF1E1 antibodies

PROTEIN BROWSER

EEF1E1-001
EEF1E1-002
EEF1E1-003
EEF1E1-004
EEF1E1-005
EEF1E1-006

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

EEF1E1-001
ENSP00000425577
ENST00000488226
D6RCQ0 [Direct mapping]
Eukaryotic translation elongation factor 1 epsilon-1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
94 aa
10.4 kDa
No 0
EEF1E1-002
ENSP00000369038
ENST00000379715
O43324 [Direct mapping]
Eukaryotic translation elongation factor 1 epsilon-1
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003746 [translation elongation factor activity]
GO:0004364 [glutathione transferase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006414 [translational elongation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006749 [glutathione metabolic process]
GO:0008285 [negative regulation of cell proliferation]
GO:0010467 [gene expression]
GO:0043065 [positive regulation of apoptotic process]
GO:0043517 [positive regulation of DNA damage response, signal transduction by p53 class mediator]
GO:0070062 [extracellular exosome]
Show all
174 aa
19.8 kDa
No 0
EEF1E1-003
ENSP00000424222
ENST00000507463
D6RBD7 [Direct mapping]
Eukaryotic translation elongation factor 1 epsilon-1; HCG15559, isoform CRA_d
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016021 [integral component of membrane]
Show all
150 aa
16.7 kDa
No 1
EEF1E1-004
ENSP00000414363
ENST00000429723
O43324 [Direct mapping]
Eukaryotic translation elongation factor 1 epsilon-1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003746 [translation elongation factor activity]
GO:0004364 [glutathione transferase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006414 [translational elongation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006749 [glutathione metabolic process]
GO:0008285 [negative regulation of cell proliferation]
GO:0010467 [gene expression]
GO:0043065 [positive regulation of apoptotic process]
GO:0043517 [positive regulation of DNA damage response, signal transduction by p53 class mediator]
GO:0070062 [extracellular exosome]
Show all
139 aa
15.5 kDa
No 1
EEF1E1-005
ENSP00000427572
ENST00000502429
H0YAL7 [Direct mapping]
Eukaryotic translation elongation factor 1 epsilon-1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
136 aa
15.2 kDa
No 0
EEF1E1-006
ENSP00000427143
ENST00000515633
H0YAH9 [Direct mapping]
Eukaryotic translation elongation factor 1 epsilon-1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
56 aa
5.9 kDa
No 0

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