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POLR1B

COLON - Expression summary

RNA expression
HPA:5.4TPM
GTEx:2.5RPKM
FANTOM5:8.1Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

5.4
overview Male, age 54 Sample 1
TPM: 5.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 7.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 5.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 6.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.2
Samples: 149

Max RPKM: 4.2
Min RPKM: 0.7
Std RPKM: 0.6
Median RPKM: 2.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 4.2
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 4.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 3.8
GTEX-1122O-1426-SM-5H11R 60-69 years, female 3.6
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 3.6
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 3.6
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 3.5
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 3.4
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 3.3
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 3.3
Show all
Colon - Transverse
RPKM: 2.7
Samples: 196

Max RPKM: 5.7
Min RPKM: 0.6
Std RPKM: 0.8
Median RPKM: 2.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 5.7
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 4.9
GTEX-144GM-1226-SM-5LU52 20-29 years, male 4.8
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 4.5
GTEX-QMRM-1226-SM-447C6 50-59 years, male 4.4
GTEX-Y114-1526-SM-4TT79 50-59 years, female 4.4
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 4.3
GTEX-W5WG-2426-SM-4LMI6 50-59 years, female 4.3
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 4.3
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 4.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

8.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 8.1
FF:10014-101C5 62,83,84 years, mixed 8.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.