We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SNRPB2
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS SMALL INTESTINE

GENE/PROTEIN

Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

RNA expression

HPA:27.8TPM
GTEx:17.3RPKM
FANTOM5:103.1Tags Per Million

SMALL INTESTINE - Annotated protein expression

Pending normal tissue analysis


SMALL INTESTINE - HPA RNA-seq

Average TPM

27.8

overview Male, age 65 Sample 1
TPM: 25.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 26.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 28.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 29.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

17.3

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 17.3
Samples: 88

Max RPKM: 24.7
Min RPKM: 10.6
Std RPKM: 2.8
Median RPKM: 17.1
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 24.7
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 24.7
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 24.4
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 24.3
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 23.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 23.0
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 21.4
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 21.0
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 20.7
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 20.7
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 20.5
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 20.5
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 20.5
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 20.5
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 20.3
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 19.8
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 19.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 19.3
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 19.1
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 19.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 18.8
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 18.6
GTEX-13O61-1326-SM-5KM31 60-69 years, male 18.5
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 18.5
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 18.5
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 18.3
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 18.3
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 18.0
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 17.9
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 17.9
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 17.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 17.8
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 17.8
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 17.8
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 17.7
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 17.6
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 17.6
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 17.5
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 17.3
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 17.3
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 17.2
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 17.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 17.2
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 17.2
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 17.1
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 17.1
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 17.0
GTEX-1192X-2526-SM-59868 50-59 years, male 16.9
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 16.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 16.7
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 16.7
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 16.7
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 16.5
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 16.5
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 16.4
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 16.3
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 16.2
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 16.1
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 16.1
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 15.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 15.9
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 15.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 15.8
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 15.7
GTEX-13113-1226-SM-5EGHT 60-69 years, female 15.7
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 15.7
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 15.7
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 15.6
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 15.6
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 15.4
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 15.2
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 15.2
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 15.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 15.0
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 14.6
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 14.6
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 14.4
GTEX-1122O-1326-SM-5H11F 60-69 years, female 14.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 14.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 14.0
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 13.9
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 13.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 13.5
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 13.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 12.8
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 12.1
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 12.1
GTEX-111YS-1426-SM-5GID8 60-69 years, male 10.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

103.1

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 103.1
FF:10024-101D6 15,40,85 years, mixed 103.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.