Cell atlas - AHDC1 - The Human Protein Atlas

We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.

AHDC1

TISSUE

CELL

PATHOLOGY

CELL ATLAS RNA EXPRESSION HUMAN CELLS MOUSE CELLS

GENE/PROTEIN

Antibody validation

Dictionary
	Nucleus

Human cell
	Nucleoplasm

Please wait until image is loaded before changing channels

GENERAL INFORMATION
Gene name	AHDC1
Gene description	AT hook, DNA binding motif, containing 1
Protein class	Disease related genes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	2
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary	Mainly localized to the nucleus.
RNA cell category	Mixed
Protein evidence	Evidence at protein level
Main location	Localized to the Nucleus (supported)

DATA RELIABILITY
Reliability score	Supported based on 2 antibodies. HPA028648 , HPA028691
	SHOW MORE

ASSAYS

RNA expression

Human cells

Mouse cells

RNA EXPRESSION OVERVIEW
RNA cell line category: Mixed Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

HUMAN CELLS

Summary

Mainly localized to the nucleus.

Main location

Nucleus (supported)


	Toggle channels	Low High G1 S G2 M N/A

Antibody	Cell line	Location
HPA028648	A-431	Nucleus
HPA028648	A-431	Nucleoli
HPA028648	U-2 OS	Nucleus
HPA028648	U-251 MG	Nucleus
HPA028648	U-251 MG	Nucleoli
HPA028691	A-431	Nucleoplasm
HPA028691	U-2 OS	Nucleoplasm
HPA028691	U-2 OS	Focal adhesion sites
HPA028691	U-251 MG	Nucleoplasm

MOUSE CELLS

Main location

Not available

Mouse gene

ENSMUSG00000037692 (version 83)


	Toggle channels	Low High G1 S G2 M N/A

Antibody	Cell line	Location
HPA028648	NIH 3T3	Nucleus
		Nucleoli
		Cytosol

GENE INFORMATION
Gene name	AHDC1 (HGNC Symbol)
Synonyms	DJ159A19.3, RP1-159A19.1
Description	AT hook, DNA binding motif, containing 1 (HGNC Symbol)
Entrez gene summary	This gene encodes a protein containing two AT-hooks, which likely function in DNA binding. Mutations in this gene were found in individuals with Xia-Gibbs syndrome. [provided by RefSeq, Jun 2014]
Chromosome	1
Cytoband
Chromosome location (bp)	27534035 - 27604431
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000126705 (version 83.38)
Entrez gene	27245
UniProt	Q5TGY3 (UniProt - Evidence at protein level)
neXtProt	NX_Q5TGY3
Antibodypedia	AHDC1 antibodies

PROTEIN BROWSER

AHDC1-001	AHDC1-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
AHDC1-001 ENSP00000247087 ENST00000247087	Q5TGY3 [Direct mapping] AT-hook DNA-binding motif-containing protein 1 Show all	Predicted intracellular proteins Disease related genes Protein evidence (Ezkurdia et al 2014) Show all	GO:0003677 [DNA binding] Show all	1603 aa 168.3 kDa	No	0
AHDC1-201 ENSP00000363123 ENST00000374011	Q5TGY3 [Direct mapping] AT-hook DNA-binding motif-containing protein 1 Show all	Predicted intracellular proteins Disease related genes Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003677 [DNA binding] Show all	1603 aa 168.3 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.