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EMC6

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:19.6TPM
GTEx:3.5RPKM
FANTOM5:27.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
 

Antibody staining

Antibody HPA062681

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA062681

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

19.6
N/A Female, age 80 Sample 1
TPM: 34.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 17.3
N/A Female, age 57 Sample 3
TPM: 19.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 14.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 11.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

3.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 2.9
Samples: 350

Max RPKM: 7.9
Min RPKM: 0.4
Std RPKM: 1.0
Median RPKM: 2.8
GTEX-11EMC-2826-SM-5PNY6 60-69 years, female 7.9
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 6.8
GTEX-1399U-2426-SM-5K7XB 50-59 years, female 5.7
GTEX-13O1R-0226-SM-5K7U5 60-69 years, male 5.5
GTEX-11DXX-2326-SM-5Q5A2 60-69 years, female 5.4
GTEX-TKQ1-1126-SM-4GIAZ 30-39 years, male 5.4
GTEX-WY7C-2426-SM-3NB2V 50-59 years, male 5.3
GTEX-ZLWG-2226-SM-5DUWO 50-59 years, female 5.3
GTEX-11I78-2626-SM-5Q5AI 50-59 years, female 5.2
GTEX-POMQ-2326-SM-5S2VS 20-29 years, female 5.2
Show all
Adipose - Visceral (Omentum)
RPKM: 4.3
Samples: 227

Max RPKM: 15.2
Min RPKM: 1.4
Std RPKM: 1.7
Median RPKM: 4.0
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 15.2
GTEX-13IVO-2426-SM-5K7V9 70-79 years, male 11.4
GTEX-11I78-0226-SM-5HL6R 50-59 years, female 10.1
GTEX-WWTW-1326-SM-4MVNT 50-59 years, male 9.3
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 9.1
GTEX-1399S-1426-SM-5PNYQ 30-39 years, female 9.0
GTEX-11DXX-2026-SM-5EGJL 60-69 years, female 8.7
GTEX-1339X-0726-SM-5L3FF 40-49 years, male 8.4
GTEX-XXEK-1426-SM-4BRW1 50-59 years, male 8.0
GTEX-1122O-0926-SM-5N9C9 60-69 years, female 7.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

27.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 27.9
FF:10010-101C1 65,65,76 years, mixed 27.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.