Fields »
ABOUT
HELP
BLOG
ADM2

COLON - Expression summary

RNA expression
HPA:1.2TPM
GTEx:0.5RPKM
FANTOM5:1.9Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

1.2
overview Male, age 54 Sample 1
TPM: 2.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 0.7
Min RPKM: 0.0
Std RPKM: 0.0
Median RPKM: 0.0
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 0.7
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 0.4
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 0.2
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 0.2
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 0.2
GTEX-V955-1726-SM-4JBHF 60-69 years, male 0.2
GTEX-XBED-1726-SM-47JYO 60-69 years, male 0.2
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 0.2
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 0.2
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 0.2
Show all
Colon - Transverse
RPKM: 0.8
Samples: 196

Max RPKM: 6.6
Min RPKM: 0.0
Std RPKM: 1.0
Median RPKM: 0.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 6.6
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 6.5
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 6.4
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 5.9
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 3.3
GTEX-QLQW-0426-SM-447A7 30-39 years, male 3.2
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 2.9
GTEX-144GN-1126-SM-5LU33 50-59 years, male 2.5
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 2.5
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 2.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

1.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 1.9
FF:10014-101C5 62,83,84 years, mixed 1.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.