Tissue expression of APOBEC3A - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	9.6	TPM
GTEx:	1.6	RPKM
FANTOM5:	2.7	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Chondrocytes:	Medium
Fibroblasts:	Medium

Antibody staining	Antibody HPA043237
Adipocytes	Medium
Chondrocytes	Medium
Fibroblasts	Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Chondrocytes:	Low
Fibroblasts:	Medium
Peripheral nerve:	Medium

Antibody staining	Antibody HPA043237
Adipocytes	Medium
Chondrocytes	Low
Fibroblasts	Medium
Peripheral nerve	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	9.6

Female, age 80

Sample 1
TPM: 1.2

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 0.1

Female, age 57

Sample 3
TPM: 0.5

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 4.7

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 41.5

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	1.6

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 0.6

Samples: 350

Max RPKM: 7.2
Min RPKM: 0.0
Std RPKM: 0.7
Median RPKM: 0.3

GTEX-11ZU8-2426-SM-5EQMV

60-69 years, male

7.2

GTEX-Y3IK-2526-SM-4WWDM

50-59 years, female

6.6

GTEX-11ZVC-2626-SM-5FQTA

50-59 years, female

4.3

GTEX-ZF3C-0226-SM-4WWB3

50-59 years, female

4.0

GTEX-13FTY-0626-SM-5L3F8

40-49 years, female

3.8

GTEX-YFC4-0226-SM-57WD2

40-49 years, female

3.1

GTEX-13O3Q-2326-SM-5KM3G

50-59 years, male

3.0

GTEX-RWSA-0226-SM-2XCBA

40-49 years, male

3.0

GTEX-YFCO-2026-SM-4W21Q

40-49 years, male

2.8

GTEX-12WSB-0226-SM-5GCOR

60-69 years, female

2.6

Show all

Adipose - Visceral (Omentum)
RPKM: 3.2

Samples: 227

Max RPKM: 70.6
Min RPKM: 0.0
Std RPKM: 7.1
Median RPKM: 0.9

GTEX-ZVZP-1126-SM-5GICU

50-59 years, male

70.6

GTEX-Y9LG-1226-SM-4VBQA

30-39 years, male

55.8

GTEX-11EM3-1126-SM-5A5KM

20-29 years, female

35.0

GTEX-ZV7C-0826-SM-59HK8

50-59 years, male

24.2

GTEX-14B4R-0526-SM-5QGQT

30-39 years, male

21.5

GTEX-ZDYS-2226-SM-5S2MI

50-59 years, male

19.3

GTEX-13VXT-0926-SM-5LU5K

20-29 years, female

18.3

GTEX-YEC4-0926-SM-5PNXY

40-49 years, male

14.5

GTEX-XBED-1326-SM-4AT4F

60-69 years, male

13.8

GTEX-Y114-1326-SM-4TT9A

50-59 years, female

13.8

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	2.7

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 2.7

FF:10010-101C1

65,65,76 years, mixed

2.7