Tissue expression of APOBEC3A - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	1.0	TPM
GTEx:	0.4	RPKM
FANTOM5:	1.1	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Medium

Antibody staining	Antibody HPA043237
Glandular cells	Medium

SMALL INTESTINE - HPA RNA-seq

Average TPM	1.0

Male, age 65

Sample 1
TPM: 0.4

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 1

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 0.9

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 1.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	0.4

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 0.4

Samples: 88

Max RPKM: 4.2
Min RPKM: 0.0
Std RPKM: 0.5
Median RPKM: 0.2

GTEX-WFG8-1626-SM-4LVMB

20-29 years, male

4.2

GTEX-13FTW-2026-SM-5IJE2

40-49 years, male

1.8

GTEX-13111-1426-SM-5DUW3

50-59 years, male

1.5

GTEX-Z9EW-0926-SM-5CVMM

40-49 years, male

1.3

GTEX-ZA64-1226-SM-5HL7B

20-29 years, male

1.3

GTEX-ZYFG-2026-SM-5E43Y

60-69 years, female

1.3

GTEX-11DXX-1626-SM-5H11H

60-69 years, female

1.1

GTEX-13CF3-1226-SM-5LZXN

60-69 years, female

1.1

GTEX-UPK5-2026-SM-4JBIM

40-49 years, male

1.1

GTEX-YB5E-1526-SM-5IFIE

40-49 years, male

1.1

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	1.1

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 1.1

FF:10024-101D6

15,40,85 years, mixed

1.1