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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:69.4TPM
GTEx:43.7RPKM
FANTOM5:129.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Low
 

Antibody staining

Antibody HPA006018

  

Endothelial cells

 Medium  

Glandular cells

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

69.4
overview Male, age 54 Sample 1
TPM: 84.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 53.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 51
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 37.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 86.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 160.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 56.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 47.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 91.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 49.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 70.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 59.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 54.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

43.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 56.2
Samples: 149

Max RPKM: 123.2
Min RPKM: 31.0
Std RPKM: 17.0
Median RPKM: 52.6
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 123.2
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 121.4
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 117.2
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 116.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 109.3
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 100.6
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 95.4
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 87.6
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 85.2
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 84.2
Show all
Colon - Transverse
RPKM: 34.2
Samples: 196

Max RPKM: 201.7
Min RPKM: 6.2
Std RPKM: 25.1
Median RPKM: 27.2
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 201.7
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 100.8
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 95.8
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 94.8
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 90.5
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 88.5
GTEX-QDVJ-1326-SM-48U1X 50-59 years, male 86.0
GTEX-117YX-0826-SM-5H11J 50-59 years, male 85.2
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 84.3
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 78.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

129.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 129.0
FF:10014-101C5 62,83,84 years, mixed 129.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.