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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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MYO1B
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

MYO1B

Gene description

Myosin IB

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

10
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Mixed
HPA (normal tissue):Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Membranous expression in most tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Pending external verification.

Reliability score

Approved based on 2 antibodies.
HPA013607 , HPA060144
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (unfavourable).
Renal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA013607
HPA060144

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

A majority of cancer cells displayed weak to moderate cytoplasmic and membranous positivity. A few cases of colorectal carcinomas displayed strong positivity. Lymphomas, urothelial and ovarian carcinomas were mainly negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most of the cancer tissues displayed moderate cytoplasmic and membranous positivity. Few cases of colorectal and head & neck cancers along with isolated cervical, lung and skin cancers showed strong staining. Gliomas, lymphomas, ovarian, endometrial, renal and liver cancers were negative.

GENE INFORMATION

Gene name

MYO1B (HGNC Symbol)

Synonyms

myr1

Description

Myosin IB (HGNC Symbol)

Entrez gene summary

Chromosome

2

Cytoband

q32.3

Chromosome location (bp)

191245185 - 191425389

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000128641 (version 83.38)

Entrez gene

4430

UniProt

O43795 (UniProt - Evidence at protein level)

neXtProt

NX_O43795

Antibodypedia

MYO1B antibodies

PROTEIN BROWSER

MYO1B-001
MYO1B-002
MYO1B-003
MYO1B-005
MYO1B-008
MYO1B-009
MYO1B-010
MYO1B-011
MYO1B-012
MYO1B-015

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

MYO1B-001
ENSP00000306382
ENST00000304164
O43795 [Direct mapping]
Unconventional myosin-Ib
B0I1S9 [Target identity:100%; Query identity:100%]
MYO1B variant protein; Myosin IB, isoform CRA_a
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000146 [microfilament motor activity]
GO:0003774 [motor activity]
GO:0005515 [protein binding]
GO:0005516 [calmodulin binding]
GO:0005524 [ATP binding]
GO:0005546 [phosphatidylinositol-4,5-bisphosphate binding]
GO:0005547 [phosphatidylinositol-3,4,5-trisphosphate binding]
GO:0005737 [cytoplasm]
GO:0005769 [early endosome]
GO:0005884 [actin filament]
GO:0005886 [plasma membrane]
GO:0005903 [brush border]
GO:0006892 [post-Golgi vesicle-mediated transport]
GO:0007015 [actin filament organization]
GO:0008152 [metabolic process]
GO:0010008 [endosome membrane]
GO:0016459 [myosin complex]
GO:0030048 [actin filament-based movement]
GO:0030175 [filopodium]
GO:0032588 [trans-Golgi network membrane]
GO:0048471 [perinuclear region of cytoplasm]
GO:0051015 [actin filament binding]
GO:0051017 [actin filament bundle assembly]
GO:0070062 [extracellular exosome]
GO:0071944 [cell periphery]
Show all
1136 aa
132 kDa
No 0
MYO1B-002
ENSP00000376130
ENST00000392316
E9PDF6 [Direct mapping]
Unconventional myosin-Ib
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003774 [motor activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0008152 [metabolic process]
GO:0016459 [myosin complex]
Show all
1107 aa
128.5 kDa
No 0
MYO1B-003
ENSP00000341903
ENST00000339514
O43795 [Direct mapping]
Unconventional myosin-Ib
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000146 [microfilament motor activity]
GO:0003774 [motor activity]
GO:0005515 [protein binding]
GO:0005516 [calmodulin binding]
GO:0005524 [ATP binding]
GO:0005546 [phosphatidylinositol-4,5-bisphosphate binding]
GO:0005547 [phosphatidylinositol-3,4,5-trisphosphate binding]
GO:0005737 [cytoplasm]
GO:0005769 [early endosome]
GO:0005884 [actin filament]
GO:0005886 [plasma membrane]
GO:0005903 [brush border]
GO:0006892 [post-Golgi vesicle-mediated transport]
GO:0007015 [actin filament organization]
GO:0008152 [metabolic process]
GO:0010008 [endosome membrane]
GO:0016459 [myosin complex]
GO:0030048 [actin filament-based movement]
GO:0030175 [filopodium]
GO:0032588 [trans-Golgi network membrane]
GO:0048471 [perinuclear region of cytoplasm]
GO:0051015 [actin filament binding]
GO:0051017 [actin filament bundle assembly]
GO:0070062 [extracellular exosome]
GO:0071944 [cell periphery]
Show all
1078 aa
125 kDa
No 0
MYO1B-005
ENSP00000388140
ENST00000451437
E7EQD9 [Direct mapping]
Unconventional myosin-Ib
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003774 [motor activity]
GO:0005524 [ATP binding]
GO:0008152 [metabolic process]
GO:0016459 [myosin complex]
Show all
303 aa
34.1 kDa
No 0
MYO1B-008
ENSP00000387610
ENST00000420448
C9K0I9 [Direct mapping]
Unconventional myosin-Ib
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003774 [motor activity]
GO:0005524 [ATP binding]
GO:0008152 [metabolic process]
GO:0016459 [myosin complex]
Show all
83 aa
9.7 kDa
No 0
MYO1B-009
ENSP00000408454
ENST00000427152
H7C2Y7 [Direct mapping]
Unconventional myosin-Ib
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003774 [motor activity]
GO:0008152 [metabolic process]
GO:0016459 [myosin complex]
Show all
192 aa
21.7 kDa
No 0
MYO1B-010
ENSP00000376132
ENST00000392318
O43795 [Direct mapping]
Unconventional myosin-Ib
B0I1S9 [Target identity:100%; Query identity:100%]
MYO1B variant protein; Myosin IB, isoform CRA_a
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000146 [microfilament motor activity]
GO:0003774 [motor activity]
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005516 [calmodulin binding]
GO:0005524 [ATP binding]
GO:0005546 [phosphatidylinositol-4,5-bisphosphate binding]
GO:0005547 [phosphatidylinositol-3,4,5-trisphosphate binding]
GO:0005737 [cytoplasm]
GO:0005769 [early endosome]
GO:0005884 [actin filament]
GO:0005886 [plasma membrane]
GO:0005903 [brush border]
GO:0006892 [post-Golgi vesicle-mediated transport]
GO:0007015 [actin filament organization]
GO:0008152 [metabolic process]
GO:0010008 [endosome membrane]
GO:0016459 [myosin complex]
GO:0030048 [actin filament-based movement]
GO:0030175 [filopodium]
GO:0030898 [actin-dependent ATPase activity]
GO:0032588 [trans-Golgi network membrane]
GO:0048471 [perinuclear region of cytoplasm]
GO:0051015 [actin filament binding]
GO:0051017 [actin filament bundle assembly]
GO:0070062 [extracellular exosome]
GO:0071944 [cell periphery]
Show all
1136 aa
132 kDa
No 0
MYO1B-011
ENSP00000401324
ENST00000418908
C9JYW1 [Direct mapping]
Unconventional myosin-Ib
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003774 [motor activity]
GO:0005524 [ATP binding]
GO:0008152 [metabolic process]
GO:0016459 [myosin complex]
Show all
163 aa
18.3 kDa
No 0
MYO1B-012
ENSP00000399459
ENST00000438652
C9JUP5 [Direct mapping]
Unconventional myosin-Ib
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003774 [motor activity]
GO:0005524 [ATP binding]
GO:0008152 [metabolic process]
GO:0016459 [myosin complex]
Show all
149 aa
16.8 kDa
No 0
MYO1B-015
ENSP00000489544
ENST00000634375
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003774 [motor activity]
GO:0005524 [ATP binding]
GO:0016459 [myosin complex]
Show all
189 aa
22.3 kDa
No 0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.