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HOXD3

COLON - Expression summary

RNA expression
HPA:0.5TPM
GTEx:1.4RPKM
FANTOM5:9.2Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

0.5
overview Male, age 54 Sample 1
TPM: 0.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.1
Samples: 149

Max RPKM: 2.8
Min RPKM: 0.3
Std RPKM: 0.5
Median RPKM: 1.0
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 2.8
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 2.7
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 2.6
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 2.5
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 2.3
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 2.2
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 2.1
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 2.1
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 2.0
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 2.0
Show all
Colon - Transverse
RPKM: 1.6
Samples: 196

Max RPKM: 5.5
Min RPKM: 0.2
Std RPKM: 0.8
Median RPKM: 1.5
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 5.5
GTEX-11GSP-1626-SM-5986N 60-69 years, female 4.8
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 4.2
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 4.1
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 3.8
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 3.6
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 3.5
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 3.5
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 3.3
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 3.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

9.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 9.2
FF:10014-101C5 62,83,84 years, mixed 9.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.