Tissue expression of TXNDC17 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	20.7	TPM
GTEx:	7.5	RPKM
FANTOM5:	23.8	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA022931
Adipocytes	Not detected
Fibroblasts	Not detected
Peripheral nerve	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA022931
Adipocytes	Not detected
Fibroblasts	Not detected
Peripheral nerve	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	20.7

Female, age 80

Sample 1
TPM: 24.2

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 15.4

Female, age 57

Sample 3
TPM: 15.9

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 25.6

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 22.4

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	7.5

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 7.3

Samples: 350

Max RPKM: 17.8
Min RPKM: 3.0
Std RPKM: 1.8
Median RPKM: 7.2

GTEX-Y5V6-2526-SM-5IFJV

60-69 years, male

17.8

GTEX-ZYVF-0226-SM-5GIEG

50-59 years, female

13.9

GTEX-13FHP-0226-SM-5K7WD

50-59 years, male

12.7

GTEX-13G51-2626-SM-5LZYW

60-69 years, male

12.7

GTEX-147F3-0626-SM-5NQ9I

50-59 years, female

12.7

GTEX-POMQ-2326-SM-5S2VS

20-29 years, female

12.3

GTEX-11EMC-2826-SM-5PNY6

60-69 years, female

12.2

GTEX-NPJ8-0226-SM-48TBN

40-49 years, male

12.2

GTEX-145MN-2626-SM-5NQAH

30-39 years, male

11.1

GTEX-YJ8O-2426-SM-5HL7S

40-49 years, female

11.0

Show all

Adipose - Visceral (Omentum)
RPKM: 7.8

Samples: 227

Max RPKM: 24.7
Min RPKM: 2.4
Std RPKM: 2.3
Median RPKM: 7.3

GTEX-13X6H-1726-SM-5Q5EH

50-59 years, female

24.7

GTEX-Y5LM-0826-SM-4VDSW

40-49 years, female

17.6

GTEX-ZYVF-1026-SM-5E44V

50-59 years, female

15.9

GTEX-1128S-0926-SM-5GZZU

60-69 years, female

15.5

GTEX-132QS-0826-SM-5K7WV

60-69 years, male

14.5

GTEX-1122O-0926-SM-5N9C9

60-69 years, female

14.0

GTEX-U8XE-1926-SM-3DB98

30-39 years, male

13.7

GTEX-1399S-1426-SM-5PNYQ

30-39 years, female

13.6

GTEX-133LE-0926-SM-5P9J1

20-29 years, female

13.3

GTEX-11WQK-1526-SM-5EGKN

50-59 years, male

13.2

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	23.8

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 23.8

FF:10010-101C1

65,65,76 years, mixed

23.8