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TEP1

COLON - Expression summary

RNA expression
HPA:19.4TPM
GTEx:7.3RPKM
FANTOM5:71.4Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

19.4
overview Male, age 54 Sample 1
TPM: 20
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 23.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 26
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 19.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 11.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 28.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 19.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 17.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 11.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 24.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 22.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 17.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.3
Samples: 149

Max RPKM: 9.3
Min RPKM: 2.6
Std RPKM: 1.1
Median RPKM: 5.2
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 9.3
GTEX-V955-1726-SM-4JBHF 60-69 years, male 8.5
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 8.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 8.1
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 7.8
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 7.5
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 7.4
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 7.3
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 7.2
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 7.2
Show all
Colon - Transverse
RPKM: 8.9
Samples: 196

Max RPKM: 18.4
Min RPKM: 3.4
Std RPKM: 3.0
Median RPKM: 8.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 18.4
GTEX-139YR-2126-SM-5KM11 50-59 years, male 16.5
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 15.8
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 15.7
GTEX-R55D-1826-SM-48FEF 50-59 years, male 15.2
GTEX-TKQ2-1326-SM-4DXT9 50-59 years, male 15.2
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 14.7
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 14.6
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 14.4
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 14.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

71.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 71.4
FF:10014-101C5 62,83,84 years, mixed 71.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.