Cell atlas - PUDP - The Human Protein Atlas

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PUDP

TISSUE

CELL

PATHOLOGY

CELL ATLAS RNA EXPRESSION

GENE/PROTEIN

Dictionary

Human cell

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GENERAL INFORMATION
Gene name	PUDP
Gene description	Pseudouridine 5'-phosphatase
Protein class	Enzymes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	5
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary
RNA cell category	Mixed
Protein evidence	Evidence at protein level
Main location	Not available

DATA RELIABILITY
Reliability score	Pending cell analysis.

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Mixed Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

GENE INFORMATION
Gene name	PUDP (HGNC Symbol)
Synonyms	DXF68S1E, FAM16AX, GS1, HDHD1, HDHD1A
Description	Pseudouridine 5'-phosphatase (HGNC Symbol)
Entrez gene summary	This gene encodes a member of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The encoded protein has no known biological function. This gene has a pseudogene on chromosome 1. Multiple alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2010]
Chromosome	X
Cytoband	p22.31
Chromosome location (bp)	7048920 - 7148190
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000130021 (version 83.38)
Entrez gene	8226
UniProt	Q08623 (UniProt - Evidence at protein level)
neXtProt	NX_Q08623
Antibodypedia	PUDP antibodies

PROTEIN BROWSER

PUDP-001	PUDP-003	PUDP-004	PUDP-005	PUDP-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
PUDP-001 ENSP00000370467 ENST00000381077	Q08623 [Direct mapping] Pseudouridine-5'-phosphatase Show all	Enzymes ENZYME proteins Hydrolases Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003674 [molecular_function] GO:0008150 [biological_process] GO:0008152 [metabolic process] GO:0009117 [nucleotide metabolic process] GO:0016311 [dephosphorylation] GO:0016787 [hydrolase activity] GO:0046872 [metal ion binding] GO:0070062 [extracellular exosome] GO:1990738 [pseudouridine 5'-phosphatase activity] Show all	228 aa 25.2 kDa	No	0
PUDP-003 ENSP00000430995 ENST00000486446	E7EVH9 [Direct mapping] Pseudouridine-5'-phosphatase Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		191 aa 21.5 kDa	No	0
PUDP-004 ENSP00000406260 ENST00000412827	Q08623 [Direct mapping] Pseudouridine-5'-phosphatase Show all	Enzymes ENZYME proteins Hydrolases Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003674 [molecular_function] GO:0008150 [biological_process] GO:0008152 [metabolic process] GO:0009117 [nucleotide metabolic process] GO:0016311 [dephosphorylation] GO:0016787 [hydrolase activity] GO:0046872 [metal ion binding] GO:0070062 [extracellular exosome] GO:1990738 [pseudouridine 5'-phosphatase activity] Show all	185 aa 20.5 kDa	No	0
PUDP-005 ENSP00000396452 ENST00000424830	Q08623 [Direct mapping] Pseudouridine-5'-phosphatase Show all	Enzymes ENZYME proteins Hydrolases SCAMPI predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003674 [molecular_function] GO:0008150 [biological_process] GO:0008152 [metabolic process] GO:0009117 [nucleotide metabolic process] GO:0016311 [dephosphorylation] GO:0016787 [hydrolase activity] GO:0046872 [metal ion binding] GO:0070062 [extracellular exosome] GO:1990738 [pseudouridine 5'-phosphatase activity] Show all	251 aa 27.6 kDa	No	0
PUDP-201 ENSP00000441208 ENST00000540122	Q08623 [Direct mapping] Pseudouridine-5'-phosphatase Show all	Enzymes ENZYME proteins Hydrolases Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003674 [molecular_function] GO:0008150 [biological_process] GO:0009117 [nucleotide metabolic process] GO:0016311 [dephosphorylation] GO:0046872 [metal ion binding] GO:0070062 [extracellular exosome] GO:1990738 [pseudouridine 5'-phosphatase activity] Show all	208 aa 23.3 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.