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CNN1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:498.0TPM
GTEx:664.4RPKM
FANTOM5:801.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 
 

Antibody staining

Antibody HPA014263

  

Antibody CAB000007

  

Endothelial cells

 Not detected   Medium  

Glandular cells

 Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected  
      
   
   

COLON - HPA RNA-seq

Average TPM

498.0
overview Male, age 54 Sample 1
TPM: 173.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 150.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 50.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 91.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 111.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3755.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 45.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 22.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 926.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 80.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 193.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 437.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 435.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

664.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1037.0
Samples: 149

Max RPKM: 3253.4
Min RPKM: 297.2
Std RPKM: 489.4
Median RPKM: 959.9
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 3253.4
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 2986.5
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 2973.2
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 2316.1
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 2118.1
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 1990.0
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 1975.8
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 1960.7
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 1932.0
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 1841.3
Show all
Colon - Transverse
RPKM: 381.2
Samples: 196

Max RPKM: 2343.8
Min RPKM: 3.2
Std RPKM: 448.0
Median RPKM: 202.9
GTEX-11GSP-1626-SM-5986N 60-69 years, female 2343.8
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 2117.8
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 1865.0
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 1755.2
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 1665.1
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 1502.2
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 1474.2
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 1313.3
GTEX-117YX-0826-SM-5H11J 50-59 years, male 1247.9
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 1204.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

801.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 801.2
FF:10014-101C5 62,83,84 years, mixed 801.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.