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COLGALT1

GENERAL INFORMATION

Gene name

 COLGALT1

Gene description

 Collagen beta(1-O)galactosyltransferase 1

Protein class

 Enzymes
Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

 Intracellular,Secreted

Number of transcripts

 3
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

 Evidence at protein level

Protein expression

 Cytoplasmic expression in several tissues.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

 Approved based on 1 antibody.
HPA047821
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

Placenta

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

 COLGALT1 (HGNC Symbol)

Synonyms

 FLJ22329, GLT25D1

Description

 Collagen beta(1-O)galactosyltransferase 1 (HGNC Symbol)

Entrez gene summary

Chromosome

 19

Cytoband

 p13.11

Chromosome location (bp)

 17555594 - 17583162

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000130309 (version 83.38)

Entrez gene

 79709

UniProt

 Q8NBJ5 (UniProt - Evidence at protein level)

neXtProt

 NX_Q8NBJ5

Antibodypedia

 COLGALT1 antibodies

PROTEIN BROWSER
COLGALT1-001
COLGALT1-005
COLGALT1-007

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
COLGALT1-001
ENSP00000252599
ENST00000252599
Q8NBJ5 [Direct mapping]
Procollagen galactosyltransferase 1
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Enzymes
   ENZYME proteins
   Transferases
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0005788 [endoplasmic reticulum lumen]
GO:0008152 [metabolic process]
GO:0016020 [membrane]
GO:0030198 [extracellular matrix organization]
GO:0050211 [procollagen galactosyltransferase activity]
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 622 aa
71.6 kDa 		Yes 0
COLGALT1-005
ENSP00000469817
ENST00000600474
M0QYH0 [Direct mapping]
Procollagen galactosyltransferase 1
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
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 138 aa
16.1 kDa 		No 0
COLGALT1-007
ENSP00000468947
ENST00000597147
M0QX72 [Direct mapping]
Procollagen galactosyltransferase 1
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
 218 aa
25.6 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.