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LSP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:40.0TPM
GTEx:7.5RPKM
FANTOM5:55.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA019693

  

Antibody CAB017781

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

40.0
overview Male, age 54 Sample 1
TPM: 39.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 54.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 34.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 50
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 97
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 21.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 22.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 28.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 33.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 28.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 28.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 54.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 28.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.4
Samples: 149

Max RPKM: 19.8
Min RPKM: 0.5
Std RPKM: 3.8
Median RPKM: 4.3
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 19.8
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 16.0
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 15.5
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 14.6
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 14.6
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 13.6
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 13.2
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 12.9
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 12.6
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 12.5
Show all
Colon - Transverse
RPKM: 9.1
Samples: 196

Max RPKM: 43.5
Min RPKM: 0.9
Std RPKM: 6.1
Median RPKM: 7.9
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 43.5
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 41.5
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 30.5
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 29.5
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 28.5
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 26.3
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 25.6
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 24.3
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 23.0
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 20.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

55.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 55.6
FF:10014-101C5 62,83,84 years, mixed 55.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.