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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:31.5TPM
GTEx:13.5RPKM
FANTOM5:35.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Low
Adipocytes:Not available
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA026678

  

Antibody CAB004399

  

Fibroblasts

 Low   Low  

Adipocytes

 Not detected  

Peripheral nerve

 Not detected  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA026678

  

Antibody CAB004399

  

Adipocytes

 Medium   Not detected  

Chondrocytes

 Medium  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Medium   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

31.5
N/A Female, age 80 Sample 1
TPM: 25.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 30.7
N/A Female, age 57 Sample 3
TPM: 25.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 41.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 33.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

13.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 14.8
Samples: 350

Max RPKM: 35.8
Min RPKM: 7.9
Std RPKM: 3.5
Median RPKM: 14.3
GTEX-NFK9-0326-SM-3MJGV 40-49 years, male 35.8
GTEX-OOBJ-0226-SM-2YUMM 60-69 years, male 25.9
GTEX-TSE9-0226-SM-3DB84 60-69 years, female 25.9
GTEX-WI4N-1126-SM-3LK7Q 40-49 years, female 25.9
GTEX-139D8-0326-SM-5IJCJ 30-39 years, female 24.4
GTEX-13111-1726-SM-5EGJZ 50-59 years, male 24.3
GTEX-QESD-1526-SM-2S1QT 20-29 years, male 24.0
GTEX-11TUW-2626-SM-5EQKZ 60-69 years, male 23.4
GTEX-1211K-2226-SM-5FQU6 60-69 years, female 23.4
GTEX-13O1R-0226-SM-5K7U5 60-69 years, male 22.9
Show all
Adipose - Visceral (Omentum)
RPKM: 11.6
Samples: 227

Max RPKM: 23.9
Min RPKM: 4.7
Std RPKM: 3.3
Median RPKM: 10.9
GTEX-ZV7C-0826-SM-59HK8 50-59 years, male 23.9
GTEX-13QBU-1326-SM-5LU4K 40-49 years, female 23.6
GTEX-ZAJG-1626-SM-5HL7I 50-59 years, female 22.2
GTEX-13PVQ-2226-SM-5L3G9 50-59 years, male 22.1
GTEX-Y114-1326-SM-4TT9A 50-59 years, female 21.9
GTEX-11EM3-1126-SM-5A5KM 20-29 years, female 21.3
GTEX-ZF3C-1026-SM-5S2OC 50-59 years, female 21.3
GTEX-ZXES-0926-SM-5E43O 30-39 years, female 20.5
GTEX-WOFM-0726-SM-3MJF8 20-29 years, male 19.9
GTEX-13N1W-1226-SM-5K7UM 70-79 years, male 19.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

35.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 35.8
FF:10010-101C1 65,65,76 years, mixed 35.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.