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In atlas

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Reliability

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Method

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Method

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Expression

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Cell line

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Detectable

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GFAP
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TISSUE ATLAS PRIMARY DATA
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

GFAP

Gene description

Glial fibrillary acidic protein

Protein class

Candidate cardiovascular disease genes
Disease related genes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

13
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enriched (cerebral cortex)
GTEx:Tissue enhanced (caudate, hippocampus, hypothalamus)
FANTOM5:Group enriched (brain, caudate, cerebellum, hippocampus)

Protein evidence

Evidence at protein level

Protein expression

Selective cytoplasmic expression of astrocytes.

DATA RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 3 antibodies.
HPA056030 , HPA063513 , CAB000039
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (cerebral cortex)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (caudate, hippocampus, hypothalamus)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (brain, caudate, cerebellum, hippocampus)

GENE INFORMATION

Gene name

GFAP (HGNC Symbol)

Synonyms

FLJ45472

Description

Glial fibrillary acidic protein (HGNC Symbol)

Entrez gene summary

This gene encodes one of the major intermediate filament proteins of mature astrocytes. It is used as a marker to distinguish astrocytes from other glial cells during development. Mutations in this gene cause Alexander disease, a rare disorder of astrocytes in the central nervous system. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Oct 2008]

Chromosome

17

Cytoband

q21.31

Chromosome location (bp)

44905008 - 44916937

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000131095 (version 83.38)

Entrez gene

2670

UniProt

P14136 (UniProt - Evidence at protein level)

neXtProt

NX_P14136

Antibodypedia

GFAP antibodies

PROTEIN BROWSER

«
GFAP-001
GFAP-002
GFAP-005
GFAP-006
GFAP-008
GFAP-009
GFAP-011
GFAP-015
GFAP-018
GFAP-019
GFAP-021
GFAP-023
GFAP-024
»

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GFAP-001
ENSP00000253408
ENST00000253408
P14136 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Plasma proteins
Candidate cardiovascular disease genes
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005882 [intermediate filament]
Show all
432 aa
49.9 kDa
No 0
GFAP-002
ENSP00000403962
ENST00000435360
P14136 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Plasma proteins
Candidate cardiovascular disease genes
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005882 [intermediate filament]
Show all
431 aa
49.5 kDa
No 0
GFAP-005
ENSP00000465320
ENST00000592320
K7EJU1 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005882 [intermediate filament]
Show all
248 aa
28.5 kDa
No 0
GFAP-006
ENSP00000466163
ENST00000588037
K7ELP4 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005882 [intermediate filament]
Show all
189 aa
21.3 kDa
No 0
GFAP-008
ENSP00000466598
ENST00000588735
K7EMP8 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
58 aa
6.6 kDa
No 0
GFAP-009
ENSP00000464795
ENST00000586127
K7EIL2 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
12 aa
1.4 kDa
No 0
GFAP-011
ENSP00000465624
ENST00000587997
K7EKH6 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005882 [intermediate filament]
Show all
191 aa
22.4 kDa
No 0
GFAP-015
ENSP00000467530
ENST00000591880
K7EPT8 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005882 [intermediate filament]
Show all
101 aa
11.4 kDa
No 0
GFAP-018
ENSP00000465629
ENST00000588316
K7EKH9 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005882 [intermediate filament]
Show all
261 aa
29.8 kDa
No 0
GFAP-019
ENSP00000467397
ENST00000586125
K7EPI4 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
64 aa
7.1 kDa
No 0
GFAP-021
ENSP00000465565
ENST00000588957
K7EKD1 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005198 [structural molecule activity]
GO:0005882 [intermediate filament]
Show all
57 aa
6.6 kDa
No 0
GFAP-023
ENSP00000467106
ENST00000593179
A0A0G2JLI8 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
9 aa
1.1 kDa
No 0
GFAP-024
ENSP00000468500
ENST00000586793
P14136 [Direct mapping]
Glial fibrillary acidic protein
Show all
Predicted intracellular proteins
Plasma proteins
Candidate cardiovascular disease genes
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005178 [integrin binding]
GO:0005198 [structural molecule activity]
GO:0005200 [structural constituent of cytoskeleton]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005882 [intermediate filament]
GO:0009611 [response to wounding]
GO:0010625 [positive regulation of Schwann cell proliferation]
GO:0010977 [negative regulation of neuron projection development]
GO:0014002 [astrocyte development]
GO:0016020 [membrane]
GO:0019900 [kinase binding]
GO:0030198 [extracellular matrix organization]
GO:0031102 [neuron projection regeneration]
GO:0042995 [cell projection]
GO:0043209 [myelin sheath]
GO:0044297 [cell body]
GO:0045103 [intermediate filament-based process]
GO:0045109 [intermediate filament organization]
GO:0051580 [regulation of neurotransmitter uptake]
GO:0060020 [Bergmann glial cell differentiation]
GO:0060252 [positive regulation of glial cell proliferation]
GO:0060291 [long-term synaptic potentiation]
GO:0097386 [glial cell projection]
GO:0097449 [astrocyte projection]
GO:0097450 [astrocyte end-foot]
Show all
438 aa
50.3 kDa
No 0

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