Fields »
ABOUT
HELP
BLOG
GFAP

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.9TPM
GTEx:0.5RPKM
FANTOM5:0.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA056030

  

Antibody HPA063513

  

Antibody CAB000039

  

Endothelial cells

 Not detected   Not detected   Not detected  

Glandular cells

 Not detected   Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected   Not detected  
     
     

COLON - HPA RNA-seq

Average TPM

1.9
overview Male, age 54 Sample 1
TPM: 2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.4
Samples: 149

Max RPKM: 4.9
Min RPKM: 0.0
Std RPKM: 0.6
Median RPKM: 0.2
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 4.9
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 2.8
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 2.1
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 2.0
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 1.9
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 1.9
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 1.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 1.6
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 1.4
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 1.3
Show all
Colon - Transverse
RPKM: 0.5
Samples: 196

Max RPKM: 28.3
Min RPKM: 0.0
Std RPKM: 2.1
Median RPKM: 0.1
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 28.3
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 9.4
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 2.9
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 1.7
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 1.7
GTEX-XBED-1526-SM-4AT5W 60-69 years, male 1.6
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 1.4
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 1.4
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 1.4
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 1.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.9
FF:10014-101C5 62,83,84 years, mixed 0.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.