Tissue expression of ZSCAN5A - Summary - The Human Protein Atlas

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ZSCAN5A

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	ZSCAN5A
Gene description	Zinc finger and SCAN domain containing 5A
Protein class	Predicted intracellular proteins Transcription factors
Predicted localization	Intracellular
Number of transcripts	9
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enhanced (testis)
GTEx:	Tissue enriched (testis)
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression in selected tissues, most abundant in Leydig cells of testis.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification. Caution, targets protein from more than one gene. Presumed off target binding observed and disregarded.
Reliability score	Uncertain based on 3 antibodies. HPA041263 , HPA043123 , HPA046836
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (testis)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Tissue enriched (testis)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	ZSCAN5A (HGNC Symbol)
Synonyms	MGC4161, ZNF495, ZSCAN5
Description	Zinc finger and SCAN domain containing 5A (HGNC Symbol)
Entrez gene summary
Chromosome	19
Cytoband	q13.43
Chromosome location (bp)	56219670 - 56368383
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000131848 (version 83.38)
Entrez gene	79149
UniProt	Q9BUG6 (UniProt - Evidence at transcript level)
neXtProt	NX_Q9BUG6
Antibodypedia	ZSCAN5A antibodies

PROTEIN BROWSER

ZSCAN5A-001	ZSCAN5A-002	ZSCAN5A-004	ZSCAN5A-005	ZSCAN5A-008	ZSCAN5A-009	ZSCAN5A-010	ZSCAN5A-019	ZSCAN5A-020

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ZSCAN5A-001 ENSP00000467238 ENST00000592355	A0A0C4DGQ1 [Direct mapping] Zinc finger and SCAN domain-containing protein 5A Show all	Predicted intracellular proteins Show all	GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding] GO:0003676 [nucleic acid binding] GO:0003700 [transcription factor activity, sequence-specific DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0006357 [regulation of transcription from RNA polymerase II promoter] GO:0046872 [metal ion binding] Show all	495 aa 55.8 kDa	No	0
ZSCAN5A-002 ENSP00000375593 ENST00000391713	Q9BUG6 [Direct mapping] Zinc finger and SCAN domain-containing protein 5A A0A024R4S6 [Target identity:100%; Query identity:100%] Zinc finger and SCAN domain containing 5, isoform CRA_a Show all	Predicted intracellular proteins Transcription factors Zinc-coordinating DNA-binding domains Protein evidence (Kim et al 2014) Show all	GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding] GO:0003677 [DNA binding] GO:0003700 [transcription factor activity, sequence-specific DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0006357 [regulation of transcription from RNA polymerase II promoter] GO:0046872 [metal ion binding] Show all	496 aa 55.9 kDa	No	0
ZSCAN5A-004 ENSP00000467631 ENST00000587340	Q9BUG6 [Direct mapping] Zinc finger and SCAN domain-containing protein 5A A0A024R4S6 [Target identity:100%; Query identity:100%] Zinc finger and SCAN domain containing 5, isoform CRA_a Show all	Predicted intracellular proteins Transcription factors Zinc-coordinating DNA-binding domains Show all	GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding] GO:0003677 [DNA binding] GO:0003700 [transcription factor activity, sequence-specific DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0006357 [regulation of transcription from RNA polymerase II promoter] GO:0046872 [metal ion binding] Show all	496 aa 55.9 kDa	No	0
ZSCAN5A-005 ENSP00000466445 ENST00000587492	K7EMC4 [Direct mapping] Zinc finger and SCAN domain-containing protein 5A Show all	Predicted intracellular proteins Show all	GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding] GO:0003676 [nucleic acid binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006357 [regulation of transcription from RNA polymerase II promoter] GO:0046872 [metal ion binding] Show all	350 aa 39.1 kDa	No	0
ZSCAN5A-008 ENSP00000468797 ENST00000592509	K7ESN6 [Direct mapping] Zinc finger and SCAN domain-containing protein 5A Show all	Predicted intracellular proteins Show all	GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding] GO:0003700 [transcription factor activity, sequence-specific DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0006357 [regulation of transcription from RNA polymerase II promoter] Show all	105 aa 12 kDa	No	0
ZSCAN5A-009 ENSP00000468008 ENST00000588955	K7EQW6 [Direct mapping] Zinc finger and SCAN domain-containing protein 5A Show all	Predicted intracellular proteins Show all	GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding] GO:0003700 [transcription factor activity, sequence-specific DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0006357 [regulation of transcription from RNA polymerase II promoter] Show all	84 aa 9.5 kDa	No	0
ZSCAN5A-010 ENSP00000466830 ENST00000592679	K7EN85 [Direct mapping] Zinc finger and SCAN domain-containing protein 5A Show all	Predicted intracellular proteins Show all	GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006357 [regulation of transcription from RNA polymerase II promoter] Show all	38 aa 4 kDa	No	0
ZSCAN5A-019 ENSP00000464936 ENST00000593106	K7EIX9 [Direct mapping] Zinc finger and SCAN domain-containing protein 5A Show all	Predicted intracellular proteins Show all	GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006357 [regulation of transcription from RNA polymerase II promoter] Show all	190 aa 20.5 kDa	No	0
ZSCAN5A-020 ENSP00000468675 ENST00000588442	K7ESE4 [Direct mapping] Zinc finger and SCAN domain-containing protein 5A Show all	Predicted intracellular proteins Show all	GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006357 [regulation of transcription from RNA polymerase II promoter] Show all	42 aa 4.5 kDa	No	0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.