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SMALL INTESTINE - Expression summary

RNA expression
HPA:212.7TPM
GTEx:44.2RPKM
FANTOM5:134.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seq

Average TPM

212.7
overview Male, age 65 Sample 1
TPM: 174.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 198.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 228.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 249.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

44.2

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 44.2
Samples: 88

Max RPKM: 94.8
Min RPKM: 16.4
Std RPKM: 13.0
Median RPKM: 42.2
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 94.8
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 87.5
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 87.1
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 68.2
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 66.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 62.6
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 59.6
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 59.6
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 58.1
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 57.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

134.7

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 134.7
FF:10024-101D6 15,40,85 years, mixed 134.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.