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MYBBP1A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.3TPM
GTEx:11.2RPKM
FANTOM5:15.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
 

Antibody staining

Antibody HPA005466

  

Endothelial cells

 Not detected  

Glandular cells

 High  
 
 

COLON - HPA RNA-seq

Average TPM

7.3
overview Male, age 54 Sample 1
TPM: 7.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 10.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 5.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 8.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 6.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 7.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 6.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 10.0
Samples: 149

Max RPKM: 32.7
Min RPKM: 4.9
Std RPKM: 3.6
Median RPKM: 9.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 32.7
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 22.0
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 19.4
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 18.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 17.1
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 17.0
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 16.1
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 15.9
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 15.7
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 15.5
Show all
Colon - Transverse
RPKM: 12.2
Samples: 196

Max RPKM: 31.6
Min RPKM: 4.4
Std RPKM: 3.5
Median RPKM: 11.8
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 31.6
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 23.2
GTEX-144GM-1226-SM-5LU52 20-29 years, male 23.0
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 22.1
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 21.4
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 19.4
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 18.9
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 18.6
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 17.7
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 17.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

15.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 15.8
FF:10014-101C5 62,83,84 years, mixed 15.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.