We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
H3F3B
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:463.0TPM
GTEx:143.1RPKM
FANTOM5:375.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA042570

 

Antibody CAB037166

 

Antibody CAB037187

 

Antibody CAB037221

 

Glandular cells

High   High   High   Medium  
       
       
       

SMALL INTESTINE - HPA RNA-seq

Average TPM

463.0

overview Male, age 65 Sample 1
TPM: 386.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 405.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 524.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 536.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

143.1

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 143.1
Samples: 88

Max RPKM: 356.8
Min RPKM: 78.6
Std RPKM: 46.6
Median RPKM: 132.5
GTEX-13111-1426-SM-5DUW3 50-59 years, male 356.8
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 299.9
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 256.8
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 240.9
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 227.4
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 218.5
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 208.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 208.1
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 200.9
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 199.2
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 199.1
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 194.9
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 178.5
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 178.3
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 175.9
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 173.1
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 168.2
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 164.9
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 164.4
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 163.0
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 161.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 161.7
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 160.5
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 158.2
GTEX-1192X-2526-SM-59868 50-59 years, male 157.6
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 153.6
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 152.8
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 152.6
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 152.1
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 151.5
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 150.5
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 149.4
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 147.9
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 147.2
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 146.4
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 145.9
GTEX-13O61-1326-SM-5KM31 60-69 years, male 142.4
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 141.8
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 141.8
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 141.7
GTEX-ZTSS-0926-SM-59865 40-49 years, male 140.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 140.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 139.6
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 133.9
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 131.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 130.6
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 130.2
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 129.9
GTEX-13113-1226-SM-5EGHT 60-69 years, female 126.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 126.3
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 124.0
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 123.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 123.8
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 122.8
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 122.1
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 121.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 121.6
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 120.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 117.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 116.8
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 116.6
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 116.4
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 115.0
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 113.7
GTEX-1122O-1326-SM-5H11F 60-69 years, female 113.6
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 110.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 110.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 109.3
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 108.8
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 108.0
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 107.5
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 106.3
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 105.8
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 105.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 103.8
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 102.8
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 101.8
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 99.2
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 98.6
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 97.3
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 96.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 93.9
GTEX-111YS-1426-SM-5GID8 60-69 years, male 92.5
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 88.6
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 87.5
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 83.9
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 80.5
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 78.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

375.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 375.0
FF:10024-101D6 15,40,85 years, mixed 375.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.