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SLC52A1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.0TPM
GTEx:0.4RPKM
FANTOM5:22.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody CAB011449

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

1.0
overview Male, age 54 Sample 1
TPM: 2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.0
Samples: 149

Max RPKM: 1.9
Min RPKM: 0.0
Std RPKM: 0.1
Median RPKM: 0.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 1.9
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 0.2
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 0.1
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 0.1
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 0.1
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 0.1
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 0.1
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 0.1
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 0.1
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 0.0
Show all
Colon - Transverse
RPKM: 0.7
Samples: 196

Max RPKM: 5.0
Min RPKM: 0.0
Std RPKM: 0.8
Median RPKM: 0.5
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 5.0
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 3.7
GTEX-13PL7-2526-SM-5IFGR 60-69 years, female 3.3
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 3.1
GTEX-13D11-0826-SM-5KLZJ 50-59 years, female 2.7
GTEX-11VI4-1526-SM-5EQKC 40-49 years, female 2.6
GTEX-S4UY-0826-SM-4AD4Z 40-49 years, female 2.6
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 2.6
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 2.5
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 2.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

22.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 22.6
FF:10014-101C5 62,83,84 years, mixed 22.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.