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TPT1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:3727.6TPM
GTEx:986.0RPKM
FANTOM5:3931.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
Endothelial cells:Not detected
 

Antibody staining

Antibody HPA039437

  

Antibody CAB008364

  

Glandular cells

 Medium   Medium  

Endothelial cells

 Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

3727.6
overview Male, age 54 Sample 1
TPM: 4136.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4630.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4248.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4135.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3744
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4137.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4307.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3198.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2600
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3355.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2948.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3875.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3140.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

986.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1071.5
Samples: 149

Max RPKM: 1834.1
Min RPKM: 530.8
Std RPKM: 236.5
Median RPKM: 1029.9
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 1834.1
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 1725.9
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 1725.3
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 1708.7
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 1665.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 1596.7
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 1520.6
GTEX-145LS-2926-SM-5O99G 60-69 years, female 1511.2
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 1507.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 1493.6
Show all
Colon - Transverse
RPKM: 921.0
Samples: 196

Max RPKM: 1845.0
Min RPKM: 476.1
Std RPKM: 241.9
Median RPKM: 888.0
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 1845.0
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 1839.8
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 1681.1
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 1561.2
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 1504.6
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 1500.9
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 1451.9
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 1424.8
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 1399.3
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 1399.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

3931.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 3931.6
FF:10014-101C5 62,83,84 years, mixed 3931.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.