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RNF122

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:5.7TPM
GTEx:8.1RPKM
FANTOM5:24.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA003888

  

Endothelial cells

 High  

Glandular cells

 High  

Peripheral nerve/ganglion

 High  
 
 

COLON - HPA RNA-seq

Average TPM

5.7
overview Male, age 54 Sample 1
TPM: 3.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 5.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 12.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 11.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 8.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.9
Samples: 149

Max RPKM: 55.4
Min RPKM: 1.4
Std RPKM: 9.5
Median RPKM: 6.2
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 55.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 53.0
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 47.9
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 41.6
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 33.9
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 31.2
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 30.9
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 30.4
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 28.5
GTEX-145LS-2926-SM-5O99G 60-69 years, female 25.6
Show all
Colon - Transverse
RPKM: 6.6
Samples: 196

Max RPKM: 61.9
Min RPKM: 1.3
Std RPKM: 7.7
Median RPKM: 3.9
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 61.9
GTEX-Y114-1526-SM-4TT79 50-59 years, female 38.8
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 36.5
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 32.4
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 29.2
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 28.9
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 28.5
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 28.2
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 26.7
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 26.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

24.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 24.4
FF:10014-101C5 62,83,84 years, mixed 24.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.