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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:23.2TPM
GTEx:23.1RPKM
FANTOM5:73.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Not detected
Adipocytes:Not detected
 

Antibody staining

Antibody HPA016865

  

Antibody HPA024801

  

Chondrocytes

 Low  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  

Adipocytes

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA016865

  

Antibody HPA024801

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

23.2
N/A Female, age 80 Sample 1
TPM: 28.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 33.6
N/A Female, age 57 Sample 3
TPM: 28.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 11.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 14
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

23.1

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 25.7
Samples: 350

Max RPKM: 77.9
Min RPKM: 5.7
Std RPKM: 11.7
Median RPKM: 22.9
GTEX-R55G-2426-SM-2TC5I 40-49 years, female 77.9
GTEX-W5WG-2526-SM-4SOJ2 50-59 years, female 62.1
GTEX-T5JW-1726-SM-3GADN 20-29 years, female 59.5
GTEX-XUZC-1826-SM-4BRVO 30-39 years, female 59.5
GTEX-ZPCL-2126-SM-57WFZ 60-69 years, female 58.2
GTEX-PWN1-0226-SM-5SI7O 40-49 years, female 55.3
GTEX-WEY5-1926-SM-3GIL8 40-49 years, female 54.9
GTEX-PWCY-1926-SM-3NB25 20-29 years, female 54.4
GTEX-S341-1626-SM-3K2B8 40-49 years, female 54.1
GTEX-OXRP-0226-SM-3NB14 60-69 years, female 53.2
Show all
Adipose - Visceral (Omentum)
RPKM: 19.1
Samples: 227

Max RPKM: 53.2
Min RPKM: 6.5
Std RPKM: 9.4
Median RPKM: 16.6
GTEX-ZF29-0826-SM-5S2NP 60-69 years, female 53.2
GTEX-1122O-0926-SM-5N9C9 60-69 years, female 52.1
GTEX-ZPCL-1026-SM-5GCOX 60-69 years, female 51.0
GTEX-13111-0626-SM-5LZVR 50-59 years, male 46.4
GTEX-131XG-0126-SM-5K7UJ 50-59 years, female 45.5
GTEX-11I78-0226-SM-5HL6R 50-59 years, female 44.8
GTEX-XAJ8-0226-SM-4GIB2 40-49 years, male 44.4
GTEX-111YS-1326-SM-5EGGK 60-69 years, male 44.2
GTEX-ZF2S-1526-SM-5S2OO 50-59 years, female 41.9
GTEX-ZYFG-1426-SM-5GICS 60-69 years, female 41.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

73.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 73.6
FF:10010-101C1 65,65,76 years, mixed 73.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.