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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:51.7TPM
GTEx:23.3RPKM
FANTOM5:85.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Low
 

Antibody staining

Antibody HPA006889

  

Antibody CAB011498

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Low   Not detected  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Low  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA006889

  

Antibody CAB011498

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

51.7
N/A Female, age 80 Sample 1
TPM: 44.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 67.3
N/A Female, age 57 Sample 3
TPM: 60.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 39.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 46.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

23.3

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 26.2
Samples: 350

Max RPKM: 56.8
Min RPKM: 7.4
Std RPKM: 9.1
Median RPKM: 25.8
GTEX-O5YT-0226-SM-32PK5 20-29 years, male 56.8
GTEX-WEY5-1926-SM-3GIL8 40-49 years, female 55.8
GTEX-ZDTT-2626-SM-5S2OP 60-69 years, male 48.6
GTEX-PWN1-0226-SM-5SI7O 40-49 years, female 47.4
GTEX-S3XE-1626-SM-3K2AJ 50-59 years, male 44.6
GTEX-NFK9-0326-SM-3MJGV 40-49 years, male 43.8
GTEX-QLQW-1226-SM-2S1Q9 30-39 years, male 43.8
GTEX-12696-2526-SM-5EQLN 60-69 years, male 43.5
GTEX-WY7C-2426-SM-3NB2V 50-59 years, male 43.5
GTEX-ZDYS-2126-SM-5S2OD 50-59 years, male 43.1
Show all
Adipose - Visceral (Omentum)
RPKM: 18.9
Samples: 227

Max RPKM: 60.0
Min RPKM: 3.4
Std RPKM: 9.6
Median RPKM: 17.0
GTEX-11DXX-2026-SM-5EGJL 60-69 years, female 60.0
GTEX-XAJ8-0226-SM-4GIB2 40-49 years, male 43.2
GTEX-131XG-0126-SM-5K7UJ 50-59 years, female 42.9
GTEX-ZT9W-1026-SM-57WG5 50-59 years, male 40.4
GTEX-12WSL-1126-SM-5CVNK 50-59 years, male 40.2
GTEX-Y8LW-0926-SM-4VBQ8 50-59 years, female 40.0
GTEX-ZP4G-1326-SM-5EGIW 20-29 years, female 39.5
GTEX-1211K-1226-SM-5EQ4N 60-69 years, female 39.1
GTEX-13O21-3126-SM-5J1OI 50-59 years, male 39.1
GTEX-VUSG-1426-SM-3GIJN 50-59 years, male 38.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

85.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 85.9
FF:10010-101C1 65,65,76 years, mixed 85.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.