Fields »
ABOUT
HELP
BLOG
DHX34

COLON - Expression summary

RNA expression
HPA:2.5TPM
GTEx:5.9RPKM
FANTOM5:7.7Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA042159

  

Antibody HPA043558

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

2.5
overview Male, age 54 Sample 1
TPM: 2.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.1
Samples: 149

Max RPKM: 17.3
Min RPKM: 2.9
Std RPKM: 2.0
Median RPKM: 5.8
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 17.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 13.3
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 12.0
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 11.6
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 10.9
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 10.4
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 10.2
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 10.0
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 9.5
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 9.5
Show all
Colon - Transverse
RPKM: 5.7
Samples: 196

Max RPKM: 33.9
Min RPKM: 1.9
Std RPKM: 2.5
Median RPKM: 5.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 33.9
GTEX-S4P3-1226-SM-4AD4Y 50-59 years, female 12.4
GTEX-Q734-1126-SM-48TZY 40-49 years, female 10.4
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 9.8
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 9.7
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 9.5
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 9.4
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 9.2
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 9.0
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 8.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

7.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 7.7
FF:10014-101C5 62,83,84 years, mixed 7.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.