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ABCB10

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.2TPM
GTEx:5.8RPKM
FANTOM5:19.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA055175

  

Antibody CAB044063

  

Antibody CAB044065

  

Endothelial cells

 Medium   Medium   Medium  

Glandular cells

 High   Low   Medium  

Peripheral nerve/ganglion

 High   Medium   Medium  
     
     

COLON - HPA RNA-seq

Average TPM

11.2
overview Male, age 54 Sample 1
TPM: 10.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 12.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 9.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 12.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 11
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 16.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 13
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.8
Samples: 149

Max RPKM: 11.5
Min RPKM: 3.2
Std RPKM: 1.3
Median RPKM: 5.6
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 11.5
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 10.0
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 9.6
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 8.5
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 8.4
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 8.2
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 8.2
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 8.0
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 7.9
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 7.9
Show all
Colon - Transverse
RPKM: 5.7
Samples: 196

Max RPKM: 8.4
Min RPKM: 1.5
Std RPKM: 1.0
Median RPKM: 5.6
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 8.4
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 8.2
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 8.0
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 8.0
GTEX-1128S-1626-SM-5H12O 60-69 years, female 7.9
GTEX-11VI4-1526-SM-5EQKC 40-49 years, female 7.9
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 7.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 7.8
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 7.8
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 7.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

19.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 19.1
FF:10014-101C5 62,83,84 years, mixed 19.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.