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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:150.6TPM
GTEx:49.6RPKM
FANTOM5:106.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Medium
Fibroblasts:High
Adipocytes:Not available
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA038602

  

Antibody HPA057592

  

Antibody CAB006329

  

Chondrocytes

 Medium   Not detected  

Fibroblasts

 High   Not detected   Medium  

Adipocytes

 Not detected   Not detected  

Peripheral nerve

 Medium  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:High
Peripheral nerve:High
 

Antibody staining

Antibody HPA038602

  

Antibody HPA057592

  

Antibody CAB006329

  

Adipocytes

 Not detected   Not detected   Not detected  

Fibroblasts

 High   Not detected   Medium  

Peripheral nerve

 High   Not detected   Low  
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

150.6
N/A Female, age 80 Sample 1
TPM: 185.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 168
N/A Female, age 57 Sample 3
TPM: 149.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 120.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 129.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

49.6

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 50.8
Samples: 350

Max RPKM: 86.7
Min RPKM: 30.1
Std RPKM: 7.2
Median RPKM: 50.7
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 86.7
GTEX-1399U-2426-SM-5K7XB 50-59 years, female 72.2
GTEX-139YR-2426-SM-5J1OB 50-59 years, male 69.5
GTEX-SN8G-0226-SM-4DM6B 50-59 years, female 67.7
GTEX-13FHP-0226-SM-5K7WD 50-59 years, male 66.8
GTEX-13U4I-0226-SM-5SIB1 40-49 years, female 66.7
GTEX-148VI-1726-SM-5S2W9 60-69 years, female 66.3
GTEX-13N1W-0226-SM-5K7W6 70-79 years, male 65.9
GTEX-13RTJ-2526-SM-5S2Q3 60-69 years, male 65.6
GTEX-Y8LW-1926-SM-4WWFZ 50-59 years, female 65.5
Show all
Adipose - Visceral (Omentum)
RPKM: 47.9
Samples: 227

Max RPKM: 79.7
Min RPKM: 21.8
Std RPKM: 10.6
Median RPKM: 48.6
GTEX-1212Z-0526-SM-5FQSQ 60-69 years, male 79.7
GTEX-11EQ9-1126-SM-5987I 30-39 years, male 77.5
GTEX-12ZZX-1726-SM-5BC63 40-49 years, female 69.2
GTEX-Y5V5-0226-SM-5S2N8 60-69 years, female 69.0
GTEX-ZF29-0826-SM-5S2NP 60-69 years, female 68.6
GTEX-1313W-1626-SM-5J1OE 50-59 years, female 66.9
GTEX-W5X1-1426-SM-3GIKH 40-49 years, female 66.7
GTEX-11GS4-1026-SM-5N9DE 60-69 years, male 65.6
GTEX-12WSG-0426-SM-5FQSE 50-59 years, female 65.5
GTEX-13OW7-1126-SM-5K7V6 50-59 years, male 65.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

106.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 106.5
FF:10010-101C1 65,65,76 years, mixed 106.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.