We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ISCU
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:39.3RPKM
FANTOM5:247.1Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA038602

 

Antibody HPA057592

 

Antibody CAB006329

 

Glial cells

Medium   Not detected   Medium  

Neuronal cells

Medium   Medium   High  
     
     
     

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

39.3

GTEx sample id

Sample description

RPKM

Brain - Hippocampus
RPKM: 39.3
Samples: 94

Max RPKM: 88.0
Min RPKM: 9.5
Std RPKM: 16.8
Median RPKM: 40.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 88.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 81.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 77.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 72.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 65.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 63.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 61.9
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 61.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 59.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 59.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 59.5
GTEX-RNOR-0011-R1A-SM-5SI8F 50-59 years, female 58.0
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 57.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 55.7
GTEX-XOTO-0011-R1B-SM-4B65C 50-59 years, male 55.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 54.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 54.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 53.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 53.3
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 52.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 52.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 52.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 52.1
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 51.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 51.4
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 50.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 50.5
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 50.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 49.8
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 49.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 48.9
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 48.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 47.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 47.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 45.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 44.7
GTEX-N7MT-0011-R1a-SM-5SI7S 60-69 years, female 44.1
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 43.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 43.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 42.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 42.4
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 42.3
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 41.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 41.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 40.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 40.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 40.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 39.7
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 38.9
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 38.2
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 37.9
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 36.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 36.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 35.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 35.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 35.1
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 35.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 33.4
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 32.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 30.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 29.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 28.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 28.4
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 27.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 27.2
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 27.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 26.8
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 26.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 25.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 25.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 25.2
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 25.0
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 23.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 22.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 22.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 21.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 20.9
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 20.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 20.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 20.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 20.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 19.7
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 18.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 18.2
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 18.0
GTEX-12WSB-0011-R1b-SM-5P9EY 60-69 years, female 16.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 16.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 16.2
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 14.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 13.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 12.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 11.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 9.5
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

247.1

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 226.8
FF:10169-103B7 60 years, female 244.1
FF:10153-102I9 76 years, female 209.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.