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PWP1

COLON - Expression summary

RNA expression
HPA:22.3TPM
GTEx:14.6RPKM
FANTOM5:55.6Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

22.3
overview Male, age 54 Sample 1
TPM: 18.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 18.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 15
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 19
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 18.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 30.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 27.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 22.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 24.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 26.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 24.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 25.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 18.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

14.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 16.3
Samples: 149

Max RPKM: 23.3
Min RPKM: 10.3
Std RPKM: 2.5
Median RPKM: 16.4
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 23.3
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 23.2
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 22.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 21.9
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 20.8
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 20.8
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 20.5
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 20.1
GTEX-13PVR-1726-SM-5Q5EC 60-69 years, female 20.1
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 20.0
Show all
Colon - Transverse
RPKM: 13.4
Samples: 196

Max RPKM: 21.2
Min RPKM: 5.1
Std RPKM: 3.1
Median RPKM: 12.8
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 21.2
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 20.4
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 20.2
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 19.8
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 19.8
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 19.8
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 19.7
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 19.5
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 19.4
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 19.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

55.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 55.6
FF:10014-101C5 62,83,84 years, mixed 55.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.