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RNASEH2B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.3TPM
GTEx:8.3RPKM
FANTOM5:17.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA040084

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

10.3
overview Male, age 54 Sample 1
TPM: 14.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 9.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 5.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 12.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 12.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 10.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 11.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 11.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.7
Samples: 149

Max RPKM: 14.9
Min RPKM: 2.8
Std RPKM: 2.1
Median RPKM: 9.6
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 14.9
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 14.8
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 14.3
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 14.1
GTEX-Y3I4-1126-SM-4TT7Y 50-59 years, male 14.0
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 13.8
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 13.7
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 13.7
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 13.7
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 13.3
Show all
Colon - Transverse
RPKM: 7.2
Samples: 196

Max RPKM: 15.1
Min RPKM: 1.5
Std RPKM: 2.2
Median RPKM: 6.7
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 15.1
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 12.7
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 12.2
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 12.1
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 12.0
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 12.0
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 12.0
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 12.0
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 11.8
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 11.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

17.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 17.7
FF:10014-101C5 62,83,84 years, mixed 17.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.