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SCRN1

CEREBRAL CORTEX - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:172.5TPM
GTEx:64.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA024517

  

Endothelial cells

 Not detected  

Glial cells

 Low  

Neuronal cells

 Medium  

Neuropil

 Medium  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

172.5
N/A Male, age 5 Sample 1
TPM: 176.1
overview Female, age 40 Sample 2
TPM: 152.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 188.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

64.5

GTEx sample id

Sample description

RPKM
Brain - Cortex
RPKM: 62.8
Samples: 114

Max RPKM: 91.9
Min RPKM: 37.6
Std RPKM: 9.1
Median RPKM: 62.9
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 91.9
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 87.2
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 86.8
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 85.9
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 81.1
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 80.3
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 79.9
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 78.3
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 75.3
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 74.6
Show all
Brain - Frontal Cortex (BA9)
RPKM: 66.3
Samples: 108

Max RPKM: 95.6
Min RPKM: 33.2
Std RPKM: 12.4
Median RPKM: 67.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 95.6
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 90.9
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 87.1
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 86.4
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 85.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 85.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 84.5
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 84.2
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 83.9
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 82.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.