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MARCH7

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:40.7TPM
GTEx:17.7RPKM
FANTOM5:80.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA014275

  

Antibody HPA022152

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Not detected  

Peripheral nerve

 Low  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA014275

  

Antibody HPA022152

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Not detected   Medium  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

40.7
N/A Female, age 80 Sample 1
TPM: 30.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 37.9
N/A Female, age 57 Sample 3
TPM: 32.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 46.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 56.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

17.7

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 18.4
Samples: 350

Max RPKM: 28.8
Min RPKM: 7.2
Std RPKM: 3.4
Median RPKM: 18.1
GTEX-12WSB-0226-SM-5GCOR 60-69 years, female 28.8
GTEX-139D8-0326-SM-5IJCJ 30-39 years, female 28.6
GTEX-ZF28-0226-SM-5S2OE 60-69 years, male 28.4
GTEX-139T8-0226-SM-5L3EA 60-69 years, male 27.9
GTEX-14E6C-0226-SM-5S2N3 40-49 years, male 27.0
GTEX-13NZ9-0526-SM-5J1OX 50-59 years, male 26.9
GTEX-XK95-0426-SM-4AT4R 40-49 years, male 26.6
GTEX-11WQC-2426-SM-5EQKQ 60-69 years, male 26.0
GTEX-TSE9-0226-SM-3DB84 60-69 years, female 25.5
GTEX-QEL4-0326-SM-3GAE5 50-59 years, male 25.3
Show all
Adipose - Visceral (Omentum)
RPKM: 16.5
Samples: 227

Max RPKM: 28.8
Min RPKM: 6.7
Std RPKM: 4.1
Median RPKM: 16.3
GTEX-113JC-0726-SM-5GZZR 50-59 years, female 28.8
GTEX-WFJO-1026-SM-3GIKL 30-39 years, male 28.8
GTEX-11ZTS-1326-SM-5EQMA 60-69 years, female 27.1
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 27.0
GTEX-117YW-0826-SM-5H11O 50-59 years, male 26.7
GTEX-11DXY-0326-SM-5H12F 60-69 years, male 25.8
GTEX-13JUV-0626-SM-5J1MQ 40-49 years, female 25.6
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 25.2
GTEX-12ZZW-2326-SM-5DUW2 50-59 years, male 25.2
GTEX-1399T-1326-SM-5PNVH 60-69 years, male 24.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

80.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 80.8
FF:10010-101C1 65,65,76 years, mixed 80.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.