Tissue expression of VPS45 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	15.5	TPM
GTEx:	6.7	RPKM
FANTOM5:	34.8	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Medium

Antibody staining	Antibody HPA027425	Antibody HPA027441
Glandular cells	Medium	High

SMALL INTESTINE - HPA RNA-seq

Average TPM	15.5

Male, age 65

Sample 1
TPM: 14.4

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 17.6

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 15.8

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 14.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	6.7

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 6.7

Samples: 88

Max RPKM: 9.8
Min RPKM: 4.6
Std RPKM: 1.1
Median RPKM: 6.6

GTEX-UPK5-2026-SM-4JBIM

40-49 years, male

9.8

GTEX-XMK1-1826-SM-4B66F

40-49 years, male

9.6

GTEX-13111-1426-SM-5DUW3

50-59 years, male

9.1

GTEX-ZF2S-1726-SM-57WFT

50-59 years, female

9.1

GTEX-13OVI-1926-SM-5IJCG

60-69 years, female

8.9

GTEX-Y3IK-1726-SM-4YCCR

50-59 years, female

8.9

GTEX-12WSK-1526-SM-5CVNO

40-49 years, female

8.6

GTEX-ZC5H-2326-SM-4WAYT

40-49 years, female

8.6

GTEX-ZQUD-0926-SM-57WE3

30-39 years, male

8.5

GTEX-VUSG-1726-SM-4KKZL

50-59 years, male

8.2

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	34.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 34.8

FF:10024-101D6

15,40,85 years, mixed

34.8