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GYPC

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:166.5TPM
GTEx:33.8RPKM
FANTOM5:175.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Low
Fibroblasts:Not detected
 

Antibody staining

Antibody HPA008965

  

Antibody CAB009445

  

Adipocytes

 Low   Low  

Chondrocytes

 Low   Not detected  

Fibroblasts

 Not detected   Low  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA008965

  

Antibody CAB009445

  

Adipocytes

 Medium   Low  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

166.5
N/A Female, age 80 Sample 1
TPM: 263.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 140.3
N/A Female, age 57 Sample 3
TPM: 135.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 144.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 149.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

33.8

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 31.6
Samples: 350

Max RPKM: 78.5
Min RPKM: 11.7
Std RPKM: 8.7
Median RPKM: 30.7
GTEX-XK95-0426-SM-4AT4R 40-49 years, male 78.5
GTEX-U8XE-0426-SM-3DB91 30-39 years, male 68.0
GTEX-ZYWO-2526-SM-5GIDM 40-49 years, female 60.2
GTEX-144GM-1926-SM-5LUAN 20-29 years, male 57.2
GTEX-14BMV-0226-SM-5S2N2 50-59 years, male 56.7
GTEX-13RTJ-2526-SM-5S2Q3 60-69 years, male 54.8
GTEX-QMRM-1726-SM-2S1QG 50-59 years, male 54.0
GTEX-117YX-2226-SM-5EGJJ 50-59 years, male 53.0
GTEX-11DXX-2326-SM-5Q5A2 60-69 years, female 52.1
GTEX-ZAJG-0226-SM-5HL81 50-59 years, female 51.8
Show all
Adipose - Visceral (Omentum)
RPKM: 37.4
Samples: 227

Max RPKM: 71.1
Min RPKM: 15.8
Std RPKM: 9.3
Median RPKM: 36.9
GTEX-WWTW-1326-SM-4MVNT 50-59 years, male 71.1
GTEX-1399S-1426-SM-5PNYQ 30-39 years, female 69.9
GTEX-U8XE-1926-SM-3DB98 30-39 years, male 68.1
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 63.3
GTEX-145MF-1026-SM-5Q5EQ 50-59 years, male 61.0
GTEX-ZYVF-1026-SM-5E44V 50-59 years, female 59.0
GTEX-1212Z-0526-SM-5FQSQ 60-69 years, male 58.6
GTEX-139D8-1626-SM-5IJFZ 30-39 years, female 58.5
GTEX-1339X-0726-SM-5L3FF 40-49 years, male 58.2
GTEX-11DXX-2026-SM-5EGJL 60-69 years, female 56.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

175.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 175.2
FF:10010-101C1 65,65,76 years, mixed 175.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.