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YME1L1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:52.4TPM
GTEx:16.8RPKM
FANTOM5:60.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA066953

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

52.4
overview Male, age 54 Sample 1
TPM: 57
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 53.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 58.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 60.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 44.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 45.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 55.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 48.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 45.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 56.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 59.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 59.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 37.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

16.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 16.4
Samples: 149

Max RPKM: 23.2
Min RPKM: 9.8
Std RPKM: 2.2
Median RPKM: 16.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 23.2
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 23.0
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 22.2
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 21.7
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 21.1
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 21.0
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 20.8
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 20.8
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 20.8
GTEX-12696-1926-SM-5EGJT 60-69 years, male 20.5
Show all
Colon - Transverse
RPKM: 17.2
Samples: 196

Max RPKM: 27.8
Min RPKM: 10.6
Std RPKM: 2.5
Median RPKM: 17.0
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 27.8
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 25.3
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 24.6
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 23.8
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 23.0
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 22.4
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 21.4
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 21.4
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 21.3
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 21.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

60.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 60.3
FF:10014-101C5 62,83,84 years, mixed 60.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.